FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804242

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804242
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131424
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC97897.448411249086925No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA88976.769691989286584No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA83236.332937667397127No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC63754.850712198685172No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA48003.6523009495982466No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT44463.3829437545653764No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT31362.3861699537375216No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG31242.3770392013635258No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA26722.033114195276357No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT25041.9052836620404185No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA24661.8763696128560996No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC19701.4989651813976137No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC16621.264609203798393No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT16461.2524348672997323No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA15891.2090637935232529No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA15781.2006939371804237No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC15131.151235695154614No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT15101.1489530070611151No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT15001.141344046749452No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT14771.1238434380326272No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG13561.0317750182615046No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA13201.004382761139518No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA12320.9374239103968833No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA12150.9244886778670562No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG11170.8499208668127587No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT10830.8240504017531045No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC9910.7540479668858047No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG9060.6893718042366691No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA7780.5919771122473825No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA7650.5820854638422206No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA7510.5714329194058924No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA7280.5539323106890675No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC7130.542518870221573No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA7070.5379534940345752No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCGAAGGAAAATGTCAGTGGGCCA7000.532627221816411No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG6570.4999086924762601No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT6460.49153883613343075No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT6320.4808862916971025No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT5940.45197224251278306No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG5930.4512113464816167No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5890.44816776235695155No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG5850.44512417823228634No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC5610.42686267348429513No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA5480.4169710250791332No Hit
CATAGACCATGTAATACCATCGTGAGCAGTCTTGTCCTTGCACACCATGG5360.40784027270513756No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA5310.40403579254930605No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG4950.3766435354273192No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGAACTGTCCCCTTCATTTTGCTG4890.3720781592403214No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4860.3697954711468225No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT4800.3652300949598247No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4780.36370830289749206No Hit
CATAGACAGAACACCACACCCCTGTCTACGCTGACATCCCAACCACACGT4610.350773070367665No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTTGGGGGAAGAGAAACAG4560.34696859021183346No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACATCGGCCGCACTGAAATT4520.34392500608716825No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4510.34316411005600195No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4450.33859873386900413No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT4310.32794618943267595No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA4220.3210981251521792No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA4070.3096846846846847No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA4010.30511930849768687No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT3920.2982712442171902No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT3920.2982712442171902No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA3860.29370586803019233No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC3800.2891404918431945No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGAATTAGAGCCAGTTCTGAGT3600.2739225712198685No Hit
CATAGATGCACCAGAAGCCACCTACCCATGGTTCTACACATAGATCTGGG3360.2556610664718773No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA3360.2556610664718773No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT3280.24957389822254689No Hit
CATAGATCATGGGACTTCAGCATGGCTTTGCCAAGATTGTAGGAGTAGAT3250.24729121012904798No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3160.24044314584855125No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCTGGGAGGAACAGGGAGATGTTCT3050.23207328950572195No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2980.2267470172875578No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT2940.22370343316289262No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2930.22294253713172632No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT2800.21305088872656439No Hit
CATAGAAAAGTCACCATGCAGCCCTGCTATCCATCAGAGCATCACCCCTT2710.2062028244460677No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG2690.2046810323837351No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT2480.18870221572924276No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT2300.17500608716824934No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGGAACAAGGGCA2250.17120160701241782No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACCAAGTATATGACACAT2170.1651144387630874No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2140.16283175066958852No Hit
CATAGAATTGCCTACTTTGGGACCCACAGCCCAGTTTTCCTTCTCTATGA2120.1613099586072559No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTAGAACAAGGGCATGGTCA2080.15826637448259068No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC2070.1575054784514244No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1980.15065741417092768No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA1970.14989651813976138No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC1910.1453311419527636No Hit
CATAGACAGAACACCACACCCCTGTCTACTTAGGAGTTCTGGCCCCTGTC1760.13391770148526905No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTTACAAACCCTGGCAAAAGGG1720.13087411736060384No Hit
CATAGAATTGCCTACTTTGGGACCCATCACCCGTAATCCCTCCCTTTTCT1700.12935232529827123No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCTTAGGAGTTCTGGCC1670.12706963720477232No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC1670.12706963720477232No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTCACTGAGGTTCTTCAACACA1660.12630874117360605No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT1630.12402605308010713No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG1450.1103299245191137No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA1450.1103299245191137No Hit
CATAGATGCACCAGAAGCCACCTACCGTACACCCGTAATCCCTCCCTTTT1390.1057645483321159No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)