FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804245

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804245
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110465
Sequences flagged as poor quality0
Sequence length150
%GC34

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT55915.061331643506993No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG52404.743583940614674No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA47284.280088715882859No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT42303.8292671887023038No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT41563.7622776445027837No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA40043.624677499660526No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA30422.753813425066763No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG27382.478613135382248No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT26642.4116235911827277No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA22001.9915810437695198No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA21841.9770968179966506No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT21141.9137283302403476No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT19791.7915176752817636No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG19491.7643597519576337No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC16931.5326121395917258No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA13551.2266328701398634No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC13381.2112433802561897No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC12151.0998958946272575No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT10990.9948852577739555No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT10640.9632010138958041No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG10240.926990449463631No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC10230.9260851853528268No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT9860.8925904132530665No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC9720.879916715701806No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA9200.832842981939981No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG9200.832842981939981No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT9120.8256008690535465No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT8610.7794323994025256No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT8440.7640429095188521No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG8190.7414113067487439No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT7680.6952428370977233No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT6980.6318743493414204No Hit
CATAGATATTCTGCCCCCTCCTCTCCAGAGACCTTTTTCTGTAGTCAAGT6740.6101480106821165No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG6670.6038111619064862No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACCGTAGCATTCTCTCA6510.589326936133617No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCAGGGCAGAGA5760.5214321278232925No Hit
CATAGATCACCAGATGCCAGTTGTGCGGAAGACACAGCACACTCTTCTAT5460.49427420449916265No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGATAGCGAGAAGAGTGGAGGC5180.46892680939664144No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5130.4644004888426198No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT4880.44176888607251164No Hit
CATAGACCACACACACAACTGAGAGTACGGAAGACACAGCACACTCTTCT4710.4263793961888381No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA4640.4200425474132078No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG4420.4001267369755126No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA4410.39922147286470827No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGGGAAAGGTATGTGGCACAT4200.3802109265378174No Hit
CATAGAGCCCCCAGAGAAGAATGACCGTCAGTGTCCCCAGGTAGCAAAAC3860.3494319467704703No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG3860.3494319467704703No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC3850.34852668265966597No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATGTCGTCAGTGTAGCT3790.34309509799484No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTTGCTCCTTCTCACACAAATCTA3780.3421898338840357No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT3690.33404245688679673No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGGTCTCATAGAGGAGAATGATATT3500.3168424387815145No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC3470.31412664644910154No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCAGCTTACACTGCACA3310.2996424206762323No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG3200.2896845154573847No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG3190.28877925134658033No Hit
CATAGATGGGATTATAGGTGTGAGCCAGACCTTTTTCTGTAGTCAAGTGA3090.2797266102385371No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT3090.2797266102385371No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTACTTTTCTAATCAA3080.2788213461277328No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACACTGACAACAATGCCTCAC3040.27520028968451543No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG3000.2715792332412982No Hit
CATAGAACCAACCTCTCTATCTCCGTACAGGGCAGAGAGTGTGTTGTATT2960.26795817679808087No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCCAGGTAGCAAAACAGAGTCTA2910.2634318562440592No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATTCTCT2870.25981079980084193No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2870.25981079980084193No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGTCTCATAGAGGAGAATGATA2840.2570950074684289No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGCCATGCTGAAGTCCCATG2760.2498528945819943No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCATTCTCTCAGGGCTGTTCTC2620.23717919703073373No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGGGTAGAGAGT2530.2290318200334948No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCTTGGTCTCATAGAGCAGCATT2520.22812655592269046No Hit
CATAGATGGGATTATAGGTGTGAGCCAGGAAACATTGGAAAGATGGGGAT2520.22812655592269046No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT2440.22088444303625582No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC2410.21816865070384286No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCACACTGACAACAATGCCTCACAC2360.2136423301498212No Hit
CATAGATGGGATTATAGGTGTGAGCCAGGGCAGAGAGTGTGTTGTATTCT2360.2136423301498212No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCTTCAGCTCTTTGAGGCATC2280.20640021726338662No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGAGGAGAATGATATTGTT2280.20640021726338662No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGGGAAAGGTAT2260.2045896890417779No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCGCATTCT2250.2036844249309736No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG2250.2036844249309736No Hit
CATAGACCACACACACAACTGAGAGTCCAGTCCAGTCCATCCAGTCCAGC2040.18467387860408274No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAGAACCAACAATGCC2040.18467387860408274No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG2040.18467387860408274No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCAGCATTC2000.18105282216086543No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTACTTTTCTAATCAATAGTAC1930.17471597338523515No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT1910.1729054451636265No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT1900.17200018105282217No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT1900.17200018105282217No Hit
CATAGACCCCCTTGAGTTCACTGGACTTGAGGTCACTGACAGGTCTTAAA1890.17109491694201784No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1880.1701896528312135No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1820.16475806816638752No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1820.16475806816638752No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACGGCAACATA1750.15842121939075726No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCACTGACAACAATGCCTCACACA1730.1566106911691486No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC1710.15480016294753993No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1650.14936857828271397No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT1640.14846331417190964No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1620.146652785950301No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1610.14574752183949669No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAAAGGTATGTGG1590.143936993617888No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCAACCAAAATGTCA1580.14303172950708368No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG1570.14212646539627935No Hit
CATAGATGGGATTATAGGTGTGAGCCATAGGAAACATTGGAAAGATGGGG1550.14031593717467072No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA1480.13397908839904044No Hit
CATAGAGCCCCCAGAGAAGAATGACCTCTAGCCAAATTCCTTACCGATCT1480.13397908839904044No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGGAGGAGAATGAT1430.1294527678450188No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCTAGCACTATTC1420.12854750373421445No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1410.12764223962341012No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCATCCAGTCCAGCTC1380.12492644729099715No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1370.12402118318019283No Hit
CATAGATATTCTGCCCCCTCCTCTCCACACTGAAGCAGAGGTAGATGGAT1340.12130539084777983No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGGTAGCAAAACAGAGTCTATGTG1330.12040012673697552No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAGGGCAGAGAG1330.12040012673697552No Hit
CATAGAAACAGCAAAGCCCTCCACTACCCACCTGCCTCTATGTGTAGAAC1330.12040012673697552No Hit
CATAGAGGCACGATCTTGTTTCACTGTTTACTCGGAGATTTGACTGTTCT1300.11768433440456252No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAATATGGGCTGGGTGATCTATGTG1280.11587380618295387No Hit
CATAGAAGTACCATCAGAGTGAACCGGGCAGAGAGTGTGTTGTATTCTAT1260.11406327796134523No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGTGCAATATGGGCT1260.11406327796134523No Hit
CATAGATACCTGTCCTCTGCCTCGAGCCAAATTCCTTACCGATCTATGTG1240.11225274973973656No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCAGGTAGCAAAACAGAGTCTATG1240.11225274973973656No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTGCAATATGG1230.11134748562893224No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACACATAGGGCACTGAGACCA1200.10863169329651927No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGAATCTTTGGGAGGCTATTAGT1160.10501063685330195No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT1120.10138958041008464No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)