FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804249

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37910
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1540440.633078343445No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT12813.3790556581376947No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG11963.154840411500923No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG7111.8754945924558164No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA5221.376945396992878No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG4961.3083619097863362No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4301.1342653653389607No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGTGTAGAACCATGTCGTC3690.9733579530466895No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT3570.9417040358744395No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG3000.7913479293062516No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2840.7491427064099182No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT2720.7174887892376681No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT2610.688472698496439No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT2610.688472698496439No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT2560.6752835663413347No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG2440.6436296491690847No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG2320.6119757319968346No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT1990.5249274597731469No Hit
CATAGACTCACTCTGTCACCCAAGCTGAGTGCAGTGCTATAATCATAGCT1890.4985491954629385No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA1790.4721709311527301No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATACTATGGCT1770.4668952782906885No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA1740.4589817989976259No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA1630.4299657082563967No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC1580.4167765761012926No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGCGCAGTGGGGGTCATCATAG1560.4115009232392508No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG1540.4062252703772091No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1380.36402004748087574No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAATGGCGTGATCTCAGC1180.311263518860459No Hit
CTTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1110.2927987338433131No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC1100.2901609074122923No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1060.2796096016882089No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTACCAAAA1020.26905829596412556No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCAGGGTAATTCTGGCCTTGTTCTA1020.26905829596412556No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC1010.2664204695331047No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT980.2585069902400422No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA920.2426800316539172No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG900.2374043787918755No Hit
CATAGATCTCAAACAGCCTCTCCCAGGTAAACAAACTTCTGGCCCTCTAT840.22157742020575047No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA800.21102611448166714No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT790.2083882880506463No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACACACTGAAACATTTTCTGG770.20311263518860456No Hit
CATAGAGGGCTATCCTTGCTCAGATCATGGTGGGAGTATACTGATAGCTC750.1978369823265629No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG750.1978369823265629No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA750.1978369823265629No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGAAAGTTGGAACCTATCAGTGTCTA740.19519915589554207No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC720.1899235030335004No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGTAGTGGTGCAATTTTGGC710.18728567660247955No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA700.1846478501714587No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC680.17937219730941703No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGGGAGGCTGAAACTC680.17937219730941703No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA670.17673437087839622No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGGTAATTCTGGCCTTGT650.1714587180163545No Hit
CATAGAACCAACCCTGATTCTGCTGGGAGACATCTATGTAGAAGCTTTGA640.16882089158533367No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA640.16882089158533367No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG640.16882089158533367No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGGTGCCATACCAA640.16882089158533367No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA620.16354523872329202No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG580.15299393299920866No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA580.15299393299920866No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA560.14771828013716698No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA540.1424426272751253No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA540.1424426272751253No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGTATGCAGTCT520.13716697441308362No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGAAACATTTTCTGGTCAGC510.13452914798206278No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA510.13452914798206278No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACTCATCCTT500.13189132155104194No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA500.13189132155104194No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC490.1292534951200211No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC480.12661566868900026No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT460.1213400158269586No Hit
CATAGATCCCTGGCAAGAATTCCTCATGGTGGGAGTATACTGATAGCTCT460.1213400158269586No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA450.11870218939593775No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG440.1160643629649169No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA420.11078871010287523No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTAGAAGCTTTGAGATTTGTG420.11078871010287523No Hit
CATAGGGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA410.1081508836718544No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA410.1081508836718544No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGTGAGAAGAGGCAAGGG410.1081508836718544No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG400.10551305724083357No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG400.10551305724083357No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCATGATTGTAGC400.10551305724083357No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC390.1028752308098127No Hit
CATAGAGCCATCATCATTTCTCACCCAGTCCCTGTGCAAAATTCTCTTGA380.10023740437879188No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT380.10023740437879188No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT380.10023740437879188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)