FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804250

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804250
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94342
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1290213.675775370460663No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA43324.591804286531979No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG32413.4353734285895996No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA31143.300756820928113No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA27712.9371859829132303No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT24782.626613809332005No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG23192.458078056432978No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG17461.850713362023277No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT13051.3832651417184287No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA12851.362065675944966No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA12231.2963473320472323No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC12101.2825676792944818No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT11711.2412287210362298No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG11061.1723304572724766No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT10431.1055521400860697No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA10381.100252273642704No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC10261.0875325941786267No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA9821.0408937694770093No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT8880.9412562803417355No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA7540.7992198596595366No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA7120.7547009815352653No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6700.710182103410994No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC6690.709122130122321No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT6540.693222530792224No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT6450.683682771194166No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6390.6773229314621271No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA5800.6147845074304128No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT5390.5713256025948146No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT5070.5374064573572747No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA4960.5257467511818702No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG4950.5246867778931971No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC4920.5215068580271778No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC4570.48440779292361835No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG4440.47062814017086774No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA4380.4642683004388289No Hit
CATAGAATACAACACACTCTCTGCCCTGGAGAACAGCTAAAAATCTTGGA4370.46320832715015575No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCCTGTTCACTCTGATGGT4270.4526085942634246No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA4240.4494286743974052No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC4070.43140912848996205No Hit
CATAGATGTGGTCTCAGTGCCCTATGCCTCTTGTAGAAGGGATGGTCTAT3880.4112696360051727No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3750.397489983252422No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3740.3964300099637489No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3620.3837103304996714No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT3580.37947043734497893No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3560.37735049076763266No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGACTCTCAGTTGTGTG3490.3699306777469208No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAGAATTTGCAAATACAGAA2960.31375209344724514No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2950.312692120158572No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2950.312692120158572No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA2870.304212333849187No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT2860.30315236056051387No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG2830.29997244069449447No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGGCCTGTTCACTCTGATG2770.2936126009624557No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA2740.2904326810964364No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC2730.28937270780776325No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG2690.2851328146530707No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGACACTGACGACATGTGTGAGAG2610.27665302834368577No Hit
CATAGATGTGCCACATACCTTTCCCACATGTGTGAGAGGGAAGGACTCTA2570.27241313518899324No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGCTGAGATTGGCCTGTGT2560.2713531619003201No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2300.24379385639481888No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT2270.24061393652879945No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA2260.23955396324012637No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT2210.23425409679676074No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA2190.23213415021941444No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTAGGCTGAGAAAGGAGGATCA2150.22789425706472194No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT2040.2162345508893176No Hit
CATAGATCATGGGACTTCAGCATGGCCATAGACATGTGTGAGAGGGAAGG1940.20563481800258634No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA1930.2045748447139132No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT1900.20139492484789384No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1850.1960950584045282No Hit
CATAGAGCTTTAAGACCTGTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT1830.19397511182718197No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACATGTGTGAGAGGGAAGGA1820.19291513853850883No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT1810.1918551652498357No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATGAGGGTGGGGAAAGAGAGC1780.18867524538381633No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA1760.18655529880647007No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGGGTGGGGAAAGAG1750.18549532551779696No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1710.18125543236310446No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATGTCTATGAGAC1690.17913548578575822No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC1690.17913548578575822No Hit
CATAGAATACAACACACTCTCTGCCCTGTTGGTTCTGCACATCTACAAGG1620.17171567276504632No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA1620.17171567276504632No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACATGTGTGAGAGGGAAGGACT1610.1706556994763732No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1610.1706556994763732No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1570.1664158063216807No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGTCATTCTTCTCTGGGGGCTCT1560.16535583303300758No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1550.16429585974433444No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACACACGGACTACAAGTACCC1450.1536961268576032No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCAAGGGGGTCTATGAGACCAA1430.15157618028025693No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT1390.14733628712556443No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGTTCTACACATAGAACA1390.14733628712556443No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATGCCTCTTGTAGAAGG1360.14415636725954506No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG1360.14415636725954506No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCTACACATAGAGAACAGCTAAAA1330.1409764473935257No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTTCTACACATAGACCAAAGC1280.13567658095016005No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGGCTGAGAAAGGAGGATCACTCT1250.13249666108414068No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1250.13249666108414068No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGAGACCA1180.1250768480634288No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCCTATGAGGACACTTTGGACTCT1180.1250768480634288No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGGTAATGGAGGAGTATGGGAT1180.1250768480634288No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACACGGACTACAAGT1140.12083695490873629No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT1110.11765703504271693No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTACACATAGAGAACAGCTAAAAA1090.11553708846537068No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1080.11447711517669755No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1070.11341714188802443No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGAGAGGAGGGGGCAGAATATCT1040.11023722202200505No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG1030.10917724873333193No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT1030.10917724873333193No Hit
CATAGATGTGCCACATACCTTTCCCAGACACACTGACGACATGGTTCTGC1030.10917724873333193No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT1010.10705730215598568No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCATAGAGCTTTAAGACCTGTCC980.10387738228996629No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)