FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33754
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1970158.36641583219766No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA11103.2884991408425672No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC6681.9790247081827341No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT4261.2620726432422824No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT3120.924334893642235No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC2910.8621200450316999No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG2870.8502695976773124No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC2360.6991763939088701No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA2060.6102980387509629No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC1710.5066066244000711No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCATGATGGGCAACAGAACAA1450.42957871659655156No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1410.41772826924216394No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT1310.3881021508561948No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1270.37625170350180714No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCCGGGAGGCGGAGCTTGT1150.34070036143864435No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG1070.31699946672986906No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC1050.3110742430526752No Hit
CATAGAACAAGGCCAGAATTACCCTGACACTGACGACATGGTGGGTGCCT1000.2962611838596907No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG970.28737334834389994No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT960.2844107365053031No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG950.28144812466670616No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG940.27848551282810924No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTATAGAGGCCTGAGATTGCTGCTA910.26959767731231854No Hit
CATAGACAGCTCACAGACTGCATACTACACTGAGGAATTCTTGCCAGGGA870.2577472299579309No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG860.254784618119334No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG860.254784618119334No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA850.2518220062807371No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG840.2488593944421402No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG830.2458967826035433No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG820.24293417076494636No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG820.24293417076494636No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG820.24293417076494636No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA810.23997155892634944No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT800.23700894708775255No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG800.23700894708775255No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT750.22219588789476802No Hit
CATAGAGAAGAGAAGGCGACAATGGCACAGACACATCATGGAATACTATG720.21330805237897732No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA670.19849499318599276No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT650.19256976950879898No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA630.18664454583160514No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT610.18071932215441133No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC580.1718314866386206No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG570.16886887480002372No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG560.16590626296142677No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTTCAGTTGACTATAAGAAA550.16294365112282988No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCAAGATTTATTGTGAAGAGTAAAA520.15405581560703915No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGGCAGTCTCAAACGTTGTGTCT510.15109320376844226No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGACGACATGGTTCTACACAT490.14516798009124846No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGTTCTACACATAGAACCCAAAGAG470.13924275641405462No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC460.13628014457545773No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA460.13628014457545773No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG450.1333175327368608No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG440.13035492089826392No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG440.13035492089826392No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT430.127392309059667No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC420.1244296972210701No Hit
CATAGATCATGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGA410.12146708538247318No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA410.12146708538247318No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC400.11850447354387628No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTACAGATTTGGACCTGCG400.11850447354387628No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC390.11554186170527937No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA390.11554186170527937No Hit
CATAGATCATGGGACTTCAGCGTGGCGGTGTTTGCAGATTTGGACCTGCG370.10961663802808556No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC370.10961663802808556No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGTACCTGCG370.10961663802808556No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG360.10665402618948866No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTGGTTCTACACATAGAACCCAAAG350.10369141435089176No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTTGACCTGCG350.10369141435089176No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG340.10072880251229485No Hit
CATAGATCGTGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG340.10072880251229485No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)