FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33754
Sequences flagged as poor quality0
Sequence length150
%GC51

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1794353.158144219944305No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT10243.033714522723233No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG8902.636724536351247No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG8222.4352669313266575No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5591.656100017775671No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA2960.8769331042246845No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG2760.8176808674527464No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG2340.6932511702316763No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT1970.5836345322035907No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1590.4710552823369082No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG1580.46809267049831127No Hit
CATAGATGTTGTTGTTCTGTTGCCCATCATGAGAAGCTTTGAGATTTGTG1390.4118030455649701No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1230.3644012561474196No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT1200.35551342063162883No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1170.34662558511583813No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1170.34662558511583813No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1020.3021864075368845No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1000.2962611838596907No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAAGCGGCACGGTCCCGG990.29329857202109383No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA990.29329857202109383No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA980.2903359601824969No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC930.2755229009895123No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA920.27256028915091546No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG920.27256028915091546No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGGTAATTCTGG910.26959767731231854No Hit
CATAGATAGCAGCAATCTCAGGCCTCTATAGGTAAACAAACTTCTGGCCC900.2666350654737216No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA870.2577472299579309No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT800.23700894708775255No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT790.23404633524915563No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTAGTATGCAGTCTGTGAGCTG780.23108372341055874No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA760.22515849973336494No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA750.22219588789476802No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA730.2162706642175742No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG720.21330805237897732No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA700.2073828287017835No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA680.2014576050245897No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA670.19849499318599276No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG650.19256976950879898No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACTCATCCTT650.19256976950879898No Hit
AATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA630.18664454583160514No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT580.1718314866386206No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA540.15998103928423296No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGCCATACCAAGAATAAGAA530.15701842744563607No Hit
GATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA520.15405581560703915No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA510.15109320376844226No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA510.15109320376844226No Hit
CATAGACTCACTCTGTCACCCAAGCTAGCAGTGCAACCCCACCGGTCCCC500.14813059192984535No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC500.14813059192984535No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC500.14813059192984535No Hit
CATAGGGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA460.13628014457545773No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT450.1333175327368608No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA450.1333175327368608No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCTGC450.1333175327368608No Hit
CATAGAGGTGAGTGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA440.13035492089826392No Hit
TATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA420.1244296972210701No Hit
CATAGACACAACGTTTGAGACTGCCTGAAACATTTTCTGGTCAGCTGTCT420.1244296972210701No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT410.12146708538247318No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG400.11850447354387628No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA400.11850447354387628No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCACGCAGAGCCTTCAGGTCA390.11554186170527937No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT370.10961663802808556No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA370.10961663802808556No Hit
CATAGAGGTGAGCGGCCGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA350.10369141435089176No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC350.10369141435089176No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)