FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804255

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804255
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18326
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA741140.439812288551785No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG6183.3722579941067337No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT5312.8975226454218053No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG3682.0080759576557896No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG3201.7461530066572084No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG2361.2877878424096911No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA2251.2277638328058496No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC2241.2223071046600458No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2191.195023463931027No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG1410.7693986685583324No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG1250.682091018225472No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT1240.6766342900796682No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT1140.6220670086216306No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT1120.6111535523300229No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC880.4801920768307323No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTAGAGAAGCTTTGAGATTT870.4747353486849285No Hit
CATAGACTCACTCTGTCACCCAAGCTGGGCGTGGTGGCTCATGCCTGGAA850.463821892393321No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT830.4529084361017134No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA810.4419949798101059No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT800.4365382516643021No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACTATGGCTTAATGTT790.4310815235184983No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGCCACAGATACCA780.4256247953726945No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG780.4256247953726945No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG730.3983411546436756No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA700.38197097020626436No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTAGAAGCTTTGA700.38197097020626436No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC660.36014405762304924No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT600.32740368874822656No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC590.3219469606024228No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA550.3001200480192077No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCCTGCATTCTATGTGTAGAACC480.26192295099858126No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT480.26192295099858126No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTAGAGGCAAGGG460.2510094947069737No Hit
CATAGATAGCAGCAATCTCAGGCCTCGTTCCAGGAAAGTTGGAACCTATC450.24555276656116992No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA450.24555276656116992No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC430.23463931026956236No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTACTATGGCTTAA420.2291825821237586No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA420.2291825821237586No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT420.2291825821237586No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT420.2291825821237586No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTGGTTCCCCAATATGAACAGAAA410.2237258539779548No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTACAGTGATGCAAGCATAGC390.21281239768634724No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA380.2073556695405435No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA380.2073556695405435No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT370.20189894139473974No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG370.20189894139473974No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA370.20189894139473974No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGCACTCATCCTT360.19644221324893593No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTTACGTGGTGTTT340.1855287569573284No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG340.1855287569573284No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA340.1855287569573284No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA330.18007202881152462No Hit
CATAGATCCAGCTTCATCCATGTCCCTTCTCTTCTCTATGTGTAGAACCA330.18007202881152462No Hit
CATAGATAGCAGCAATCTCAGGCCTCCACTGAAACATTTTCTGGTCAGCT330.18007202881152462No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA330.18007202881152462No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG320.17461530066572084No Hit
CATAGACTCACTCTGTCACCCAAGCTATAGTTCAGTGGCGCGATTTTGGC310.16915857251991706No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA310.16915857251991706No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGCCATACCAAGAATAAGA270.14733165993670194No Hit
CATAGAGGGCTATCCTTGCTCAGATCACATTTATCGGGAGCCACAGATCT270.14733165993670194No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA270.14733165993670194No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA260.1418749317908982No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA260.1418749317908982No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA260.1418749317908982No Hit
CATAGATCCAGCTTCATCCATGTCCCTACTACCGTACAGGAAAGTTGGAA250.1364182036450944No Hit
CATAGAGCCATCATCATTTCTCACCCAGGCACAGATCTGTTTTCAGCTAA240.13096147549929063No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT230.12550474735348685No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC220.12004801920768307No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA220.12004801920768307No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGGAAAGTTGGAACCTATCAGTGT220.12004801920768307No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGATCGTGGC210.1145912910618793No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC210.1145912910618793No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG210.1145912910618793No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCTCTATGTGTAGAACCATGTCGT210.1145912910618793No Hit
GATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA210.1145912910618793No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA200.10913456291607553No Hit
CATAGATCCAGCTTCATCCATGTCCCCAGTTAACCTGTGTATATTCTCCT200.10913456291607553No Hit
TATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA200.10913456291607553No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC200.10913456291607553No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA190.10367783477027175No Hit
CATAGGGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA190.10367783477027175No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)