FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804258

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804258
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67422
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1855627.522173771172614No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA51107.579128474385216No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG48667.217228797721812No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG42826.351042686363502No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG31834.721010945982024No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA25213.739135593723117No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG20913.1013615733736764No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC13461.9963810032333658No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT11141.6522796713239No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC10721.5899854646851175No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA10631.5766367061196642No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT7251.0753166622170804No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA6440.9551778351279997No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT6310.9358962949779004No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT5170.7668120198154905No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA4860.7208329625344843No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA4150.6155260894070185No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA3520.5220847794488446No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG2570.38118121681350303No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG2460.36486606745572664No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC2440.3618996766634036No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG2240.3322357687401738No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGACATGGTTCTACACA2030.30108866542078255No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT2000.2966390792322981No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1980.29367268843997507No Hit
CATAGAGCTTGGGTGCGAACATCAACTACGCTATACCACACTACACACTC1960.2907062976476521No Hit
CATAGACCAGCAGACACTCCCATCATTACACTGACGATCATTGTTCACTG1790.2654919759129068No Hit
CATAGATCACGTAGAAACTGGAGAGGCCAGTGCAGTGGGGAGGCAGGCTG1750.2595591943282608No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA1690.25066002195129183No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT1430.2120969416510931No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA1350.20023137848180117No Hit
CATAGATGGCCAAGATACGAGCACATACATGACGCTATACCACACTACAC1350.20023137848180117No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT1330.1972649876894782No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGCCCTCTCTGCTGTTCCTT1260.1868826199163478No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG1260.1868826199163478No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1240.1839162291240248No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCTCTGTCATTGTCGCTGTCCC1210.17946664293554032No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGGGTGGAAGGGTAAGAGA1210.17946664293554032No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT1200.17798344753937884No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA1130.1676010797662484No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1120.1661178843700869No Hit
CATAGACATTTAATCCTCACAATGACCCATGCATCTATACGCTATACCAC1110.1646346889739254No Hit
CATAGACCCAAGACCCCAGCCTTTACTACCGTACATTGCTTCTTGTGGTA1110.1646346889739254No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1070.15870190738927947No Hit
CATAGAGCTTGGGTGCGAACATCAACAATCTACAAAGGATTCTGGGCCAT1060.15721871199311796No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC1030.1527691258046335No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC990.14683634421998754No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACATTAACTGGGTGTGGTGG990.14683634421998754No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG980.14535314882382605No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGTTCTACAC970.14386995342766457No Hit
CATAGAAAAAACAGTTGGCCAGGCATGCTGAAGTGATGGGCTAGATCTAT960.14238675803150308No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGTCATTGTCGCTGTCCCAT940.1394203672391801No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT910.13497078105069563No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA900.13348758565453414No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCATGACAGAGCGAGACTTCTATT870.12903799946604966No Hit
CATAGAGCTTGGGTGCGAACATCAACGTAGCAGCATAATTTCCCATGTCA860.12755480406988817No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT850.12607160867372666No Hit
CATAGAGAAGACTCCCTCAACCCACCCTGCAGTCTTTGGAGGAATCTATG820.12162202248524222No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT810.12013882708908072No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGATCATTGTTCACTGC800.11865563169291922No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT800.11865563169291922No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT790.11717243629675773No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT780.11568924090059624No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGTTTCCCCACTCAAATACC750.11123965471211178No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGCTATACCACACTACA750.11123965471211178No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA740.10975645931595027No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTCACCCACAGCCAGGAAAGAA720.1067900685236273No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCCCCACACCCTCTTCTTCTA720.1067900685236273No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACATAGAGTGTCTGTTTCCCCA720.1067900685236273No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)