FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804259

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804259
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67422
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1883027.928569309720864No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT51257.601376405327638No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG48257.156417786479191No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG42286.27095013497078No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG31524.675031888701017No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC25253.7450683753077634No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG20903.099878377977515No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG13572.0126961525911424No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT10981.6285485449853163No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC10841.6077838094390555No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT10801.6018510278544094No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT8931.3244934887722108No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT7231.0723502714247575No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA6430.9536946397318382No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG6220.922547536412447No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT5280.7831271691732669No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA4830.7163833763459998No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA4170.6184924801993414No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT3540.5250511702411675No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC2480.3678324582480496No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG2440.3618996766634036No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC2240.3322357687401738No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT2010.2981222746284596No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTAGTTGATGTTCGCACCCAAGCTC1920.28477351606300616No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTAGGATTTGAGCTCATG1780.26400878051674526No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT1730.25659280353593783No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAATGATGGGAGTGTCT1720.25510960813977634No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT1430.2120969416510931No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCATGTATGTGCTCGTATCTTGGC1330.1972649876894782No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT1320.19578179229331671No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT1280.18984901070867077No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCTGGTGTTTTCCTTGATCTATG1260.1868826199163478No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1220.1809498383317018No Hit
CATAGATGGGACAGCGACAATGACAGAGATGAGCATGCCTTTGATAAAAC1210.17946664293554032No Hit
CATAGACCCTCTCTTACCCTTCCACCCACATAGATGCCTGGCCAACTGTT1190.17650025214321735No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGTAAAGGCTGGGGTCTTGGGT1180.17501705674705584No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT1180.17501705674705584No Hit
CATAGACCAGTTACCACAAGAAGCAATGTACGGTAGTAAAGGCTGGGGTC1150.17056747055857138No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1130.1676010797662484No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT1130.1676010797662484No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC1040.154252321200795No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC1030.1527691258046335No Hit
CATAGATGCCACCACACCCAGTTAATGTCTGAATGATGGGAGTGTCTGCT1020.15128593040847202No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTATAGATGCATGGGTCATTGTGAG1020.15128593040847202No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG1000.14831953961614905No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTGTTGATGTTCGCACCCAAGCT1000.14831953961614905No Hit
CATAGATGGGACAGCGACAATGACAGTGTGGTGGGTTGAGGGAGTCTTCT960.14238675803150308No Hit
CATAGATCTAGCCCATCACTTCAGCATGCCTGGCCAACTGTTTTTTCTAT950.1409035626353416No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT920.1364539764468571No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGACTGTTAATATAGAAGAGAC870.12903799946604966No Hit
CATAGATGACATGGGAAATTATGCTGCTACGTTGATGTTCGCACCCAAGC860.12755480406988817No Hit
CATAGATTCCTCCAAAGACTGCAGGGTGGGTTGAGGGAGTCTTCTCTATG840.12458841327756519No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT840.12458841327756519No Hit
CATAGAAGTCTCGCTCTGTCATGCAATAGAAGTCTCGCTCTGTCATGCAT820.12162202248524222No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT820.12162202248524222No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA810.12013882708908072No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT800.11865563169291922No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG780.11568924090059624No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACAGTTGTGGAAAGTGCAATGA740.10975645931595027No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA740.10975645931595027No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGTGCTCGTATCTTG730.10827326391978878No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGCATAAAAACTGTCGGAGGTCTA730.10827326391978878No Hit
CATAGATTCTTTCCTGGCTGTGGGTGACACTGTCAGACCCAGGCTACACA720.1067900685236273No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCCATGCTGAAGTCCCA700.10382367773130433No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTACGAATGAG700.10382367773130433No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)