FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804266

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804266
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54522
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2450144.937823264003526No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA17063.1290121418876784No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC9941.8231172737610504No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT9111.670885147279997No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC5501.0087671031877041No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC5230.9592458090312167No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT5210.9555775650196252No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC4870.8932174168225671No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC4770.8748761967646087No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTTGTGC4720.8657055867356297No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT4720.8657055867356297No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGTTA4560.8363596346428964No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT4080.7483217783646968No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG4010.7354829243241261No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG3890.7134734602545761No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3330.6107626279300099No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA3330.6107626279300099No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG3280.6015920179010308No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGCTTGAGCCCAGGAGTTTGAGGT2700.49521294156487283No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA2530.46403286746634387No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA2240.41084332929826495No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAACTTCAGT2150.39433623124610245No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATTCTGTGCTCATACAGAATT2110.3869997432229192No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC1920.3521514251127985No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTTCAGTTGACTATAAGAAA1860.34114669307802353No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA1820.33381020505484027No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1790.3283078390374528No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1770.32463959502586115No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1470.26961593485198637No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT1450.2659476908403947No Hit
CATAGAACAAGGCCAGAATTACCCTGATCTGAGCAAGGATAGCCCTCTAT1420.26044532482300725No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT1400.2567770808114156No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTTCTAC1390.2549429588056198No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC1350.24760647078243642No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT1320.24210410476504896No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1310.24026998275925313No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTAGACTCTTCACT1300.2384358607534573No Hit
CATAGACAGGAGGAGGAAGAAGAGGATCGTGGGATGGAATCCGCTGAAGG1250.22926525072447818No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT1180.21642639668390742No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACCATGTCGGACTCTTCACT1170.2145922746781116No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG1120.20542166464913247No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT1100.20175342063754081No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTACAAGAGTTACCCAAAGCAT1080.19808517662594916No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1070.19625105462015335No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC1060.1944169326143575No Hit
CATAGACTTGATGCCCAGGAAACCTCTAAAAAGATGCTCTTCCTCATTCG1040.19074868860276584No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1040.19074868860276584No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1030.18891456659697003No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1020.1870804445911742No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT980.17974395656799091No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTACTTAAAGACTTGAGA960.17607571255639926No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG950.17424159055060343No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTACTGGGAGAGGCT940.1724074685448076No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC920.16873922453321596No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCCAGAGGCTGTGCCTTACCAA910.16690510252742013No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG900.1650709805216243No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG880.16140273651003265No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG860.157734492498441No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTCAGACATGTTTCCT850.15590037049264516No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG850.15590037049264516No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG840.15406624848684933No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGGAGACAGCCGCTCAC830.15223212648105353No Hit
CATAGATCTGTGGCTCCCGATAAATGTACACTGATCTGAGCAAGGATAGC830.15223212648105353No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA830.15223212648105353No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC820.1503980044752577No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG810.14856388246946187No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTCTGGGTGAGAAATGATGA810.14856388246946187No Hit
CATAGACTTGATGCCCAGGAAACCTCTAAAAAAATGCTTATCCTCGTTCA810.14856388246946187No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAGGTGGAGGCTGC800.14672976046366604No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGGTCTCATAGAGGCCTGAG800.14672976046366604No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCCGAGAGGTGGAGCTTGC800.14672976046366604No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC780.14306151645207438No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTCAGACATGTTTCCTAGTT750.13755915043468692No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGGCAACA710.13022266241150363No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGATGGCAGAGGTGACAAAAGAGAA700.1283885404057078No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACACTGACGACTCTTCACTATGTC700.1283885404057078No Hit
CATAGATCTGTGGCTCCCGATAAATGTACACTGACGACATGGTGTTACAA700.1283885404057078No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC690.12655441839991197No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGAATTAGCGGAGAGTGAGAACTCT680.12472029639411615No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT680.12472029639411615No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA650.11921793037672865No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG630.115549686365137No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTATGAGCCGAGACCGTGCCAC630.115549686365137No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC620.11371556435934117No Hit
CATAGAGCTATCAGTATACTCCCACCATGAACACTGAGGAATTCTTGCCA620.11371556435934117No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA610.11188144235354536No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC590.10821319834195371No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA580.10637907633615788No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA570.10454495433036205No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG550.10087671031877041No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC550.10087671031877041No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)