FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804267

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804267
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54522
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2325042.64333663475294No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT16983.114339165841312No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG15702.879571549099446No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG9861.8084442977146837No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6591.208686401819449No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG6451.1830086937383073No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA5801.0637907633615789No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT5070.9298998569384835No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC4890.8968856608341587No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAACCATGTCGTCAGTGTAG4730.8675397087414254No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT4520.8290231466197131No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG4380.8033454385385715No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCATGTCGTCAGTGTAGAAGCT4210.7721653644400426No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG4180.7666629984226551No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG4070.746487656358901No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT3810.6988004842082095No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT3710.6804592641502513No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG3130.5740801878140934No Hit
CATAGACTCACTCTGTCACCCAAGCTAGCATGCAATAGTGTAATGATAGC2570.4713693554895272No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA2390.43835515938520236No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT2140.3925021092403067No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG2080.3814973772055317No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGAATAGAGGCAAGGGTAC2040.3741608891823484No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTTGGTCTCATAGAGAAGCT1970.36132203514177763No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGCCATACCAAGAATAAGAA1810.3319760830490444No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA1800.3301419610432486No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1730.3173031070026778No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT1680.30813249697369866No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC1540.28245478889255715No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGGGTAATTCTGGCCTTGTTCTAT1400.2567770808114156No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1390.2549429588056198No Hit
CATAGACAAGCCTGCCAAGACCTCTCCTGCCCCAAGGGGCCCTTCAGCGG1360.2494405927882323No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG1350.24760647078243642No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT1320.24210410476504896No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA1320.24210410476504896No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT1290.2366017387476615No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTACGGTAGCAGAAGCTTTG1270.23293349473606983No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1270.23293349473606983No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCCGACATGGTTCCCCAATAT1120.20542166464913247No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC1110.20358754264333664No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT1080.19808517662594916No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC1070.19625105462015335No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC1050.19258281060856167No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC1050.19258281060856167No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC1020.1870804445911742No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGAAGACTGATGCTACCCGATTGC1000.18341220057958255No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA980.17974395656799091No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA980.17974395656799091No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA960.17607571255639926No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA920.16873922453321596No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC910.16690510252742013No Hit
CATAGATCCAGCTTCATCCATGTCCCTGAAAAGAACACGAATGAGGAAGA900.1650709805216243No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA890.16323685851582848No Hit
CATAGACACAACGTTTGAGACTGCCTGCCTCAGTTTCCCCATTGGTAAGG880.16140273651003265No Hit
CATAGATCTCAAACAGCCTCTCCCAGTACGGTAGCAGAGGCAAGGGTACT880.16140273651003265No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA850.15590037049264516No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA820.1503980044752577No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA800.14672976046366604No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTACATTTATCGGGAGCCACA800.14672976046366604No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGAGGCAAGGGTACTATTTTGA790.1448956384578702No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC790.1448956384578702No Hit
CATAGAGCCATCATCATTTCTCACCCAGACACTGAAACATTTTCTGGTCA780.14306151645207438No Hit
GATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA780.14306151645207438No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTGTGCCATACCAAGAAT770.14122739444627858No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC760.13939327244048275No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACGAGGATAA760.13939327244048275No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA750.13755915043468692No Hit
CATAGATAGCAGCAATCTCAGGCCTCTATGAGACCACAGGAAAGTTGGAA750.13755915043468692No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTTGTGACACCGA740.1357250284288911No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGCTGGAGTGCAGTAGTGTGATCT730.13389090642309526No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCATGTCGTCAGTGTACATTTA730.13389090642309526No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG720.13205678441729946No Hit
CATAGAACTGAAACTAGGAAACATGTCTGACACTGAAACATTTTCTGGTC700.1283885404057078No Hit
CATAGACTCACTCTGTCACCCAAGCTGGATTGCAGTGGCGCGATCTCTGC700.1283885404057078No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG690.12655441839991197No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA690.12655441839991197No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA680.12472029639411615No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT670.12288617438832031No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAGGCAAGGGT660.12105205238252448No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG630.115549686365137No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCACGGTCTCGGC610.11188144235354536No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCCTCTTCTTCCTCCTCCTGTCT610.11188144235354536No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTTCATGGTGGGAGTATACTGA600.11004732034774953No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTTGATTTGTTTTCTTCTCTTTTGT600.11004732034774953No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA580.10637907633615788No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA580.10637907633615788No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA550.10087671031877041No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)