FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804269

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804269
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23875
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1116546.76439790575916No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA10484.389528795811518No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG6382.6722513089005235No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG4061.700523560209424No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT3791.5874345549738218No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC3671.53717277486911No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTTCATAGATGATGTTTTAA3261.3654450261780104No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT2931.2272251308900524No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG1830.7664921465968586No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG1800.7539267015706806No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG1490.6240837696335079No Hit
CATAGATGATGTGAAAAGGACCCATGGCTCTATGTGTAGAACCATGTCGT1190.49842931937172774No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG1060.44397905759162304No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA990.4146596858638743No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC860.3602094240837696No Hit
CATAGACCAGCTTTGCATGAGTGTGGGACTTGGTCTCATAGACCAGCTTT770.3225130890052356No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG740.3099476439790576No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTTTTAAAATGAGCACCT700.2931937172774869No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC680.2848167539267016No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT660.2764397905759162No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT650.27225130890052357No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA600.2513089005235602No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA590.24712041884816754No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA580.24293193717277484No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTACCAGTGTAGCAGA560.2345549738219895No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG550.23036649214659685No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA530.22198952879581152No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGGTAGCAAAGCTGCT530.22198952879581152No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA520.21780104712041884No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT520.21780104712041884No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA510.2136125654450262No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA500.20942408376963353No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG500.20942408376963353No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG500.20942408376963353No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC490.20523560209424083No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG490.20523560209424083No Hit
CATAGATGTGAGCACTACTGATAATCCCTCTATGATGTTTTAAAATGAGC490.20523560209424083No Hit
CATAGATTAGGGGTGACGGACTAGCCTAGACTTGGCCTCAGTTTCCCCTC490.20523560209424083No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA480.2010471204188482No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG480.2010471204188482No Hit
CATAGACTGGCGGTGATTGCTTTCCTATGTGTAGAACCAGGCCTGTGTTC480.2010471204188482No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA460.19267015706806281No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA460.19267015706806281No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT450.18848167539267016No Hit
CATAGATGACCTGTTAATCTGCCCCCACACTGATGTGGCATGGAGAAGGG440.18429319371727748No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG440.18429319371727748No Hit
CATAGACCAAACACAGAAGACATGGCAGCATTTAATCTATGTGTAGAACC430.1801047120418848No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG430.1801047120418848No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTTACGGTAGCAGACACTGG430.1801047120418848No Hit
CATAGACTTACTGCCCTCACTCCGTCACCCAGGCTGGAGTCCAGTAGCGT400.1675392670157068No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGAGAGAAAACTACCCCAGG390.16335078534031414No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA380.15916230366492146No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA380.15916230366492146No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT370.1549738219895288No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA340.1424083769633508No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC340.1424083769633508No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC330.1382198952879581No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA330.1382198952879581No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA320.13403141361256543No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA320.13403141361256543No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACTTGGCCTCAGTTTCCCCTC310.12984293193717278No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA310.12984293193717278No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA300.1256544502617801No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA270.11308900523560209No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA270.11308900523560209No Hit
CATAGAGGTGAGCGGCCGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA260.10890052356020942No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA250.10471204188481677No Hit
CATAGATACGATCATAAGGGTGGGGCGTGGTCATGCACACCTGTGATCCT250.10471204188481677No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGGCCTC240.1005235602094241No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCACGCAGAGCCTTCAGGTCA240.1005235602094241No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGAGACCAAGCCATCAATTT240.1005235602094241No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)