FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71873
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA995913.856385568989745No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT42195.870076384734184No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG35694.965703393485732No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA33514.662390605651636No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA28393.950022957160547No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT27113.7719310450377748No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA15492.1551904052982342No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT15342.1343202593463473No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA15022.089797281315654No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC11721.630654070374132No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA11651.620914668929918No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG10481.4581275305051968No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9241.285600990636261No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG8841.229947268097895No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA8011.114465793830785No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7921.1019437062596524No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT7841.090812961751979No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6780.9433305970253085No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT6610.9196777649465029No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT6250.8695894146619733No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC6010.8361971811389535No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGACGGCAACATATCAGAAG5540.770804057156373No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5460.7596733126486998No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA5460.7596733126486998No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT5390.7499339112044857No Hit
CATAGAACCAACCTCTCTATCTCCGTCACTGAGCTGAGGGTCACTTCTAT5370.7471512250775674No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT4830.6720186996507729No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA4790.6664533273969362No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4310.5996688603508967No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCCCCAGGTAGCAAAACA3850.5356670794317755No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG3700.5147969334798881No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT3570.4967094736549191No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT3400.47305664157611343No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTCCCCAGGTAG3350.4660999262588177No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3260.45357783868768525No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3180.44244709418001194No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG3160.4396644080530937No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG3150.4382730649896345No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTACGGCAACATATCAG3110.43270769273579784No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCCCCAGGTAGCAAAAC3110.43270769273579784No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG3080.4285336635454204No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG3070.42714232048196127No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT2990.41601157597428795No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2880.4007068022762373No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG2880.4007068022762373No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2840.39514143002240065No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG2710.3770539701974316No Hit
CATAGATCACCAGATGCCAGTTGTGCCTACACATAGGAGGAGCTGACTTA2680.37287994100705407No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2660.3700972548801358No Hit
CATAGAGTCCTTCCCTCTCACACATGTTACGGCAACATATCAGAAGCATC2610.36314053956284004No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT2550.35479248118208506No Hit
CATAGACCACACACACAACTGAGAGTACACTGACAACAATGCCTCACACA2440.33948770748403434No Hit
CATAGAGGCACGATCTTGTTTCACTGTCATAGGGCACTGAGACCACATCT2430.3380963644205752No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT2380.3311396491032794No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2370.32974830603982025No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT2220.3088781600879329No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2120.2949647294533413No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT2100.292182043326423No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTCATAGGGCACTGAGACCACAT2070.28800801413604554No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCACGGCAACATATCAGAAGCATC1960.27270324043799476No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC1940.2699205543110765No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT1920.2671378681841582No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC1910.265746525120699No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGCTTACACTGCACATGGGG1870.2601811528668624No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT1840.2560071236764849No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1770.24626772223227078No Hit
CATAGAGCCCCCAGAGAAGAATGACCATGTCGTCAGTGTAGGAAACATTG1760.24487637916881166No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1670.23235429159767923No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT1660.2309629485342201No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1560.2170495178996285No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1520.21148414564579188No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACAGGGCAGAGAGTGTGTT1410.19617937194774115No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1340.18643997050352704No Hit
CATAGAGGCACGATCTTGTTTCACTGTCAAGACTTGGTCTCATAGGGCAC1310.1822659413131496No Hit
CATAGAGGCACGATCTTGTTTCACTGTTTGGTTCATAGGGCACTGAGACC1270.17670056905931297No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCATTCTCTCAGGGCTGTTCTC1210.168352510678558No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1160.16139579536126222No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAACAATGCCTCACACACAG1120.1558304231074256No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT1060.14748236472667065No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC1040.14469967859975236No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCGCATTCT1020.141916992472834No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTGCATTCTCTCAGG990.13774296328245655No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA990.13774296328245655No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT970.13496027715553824No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT960.1335689340920791No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA960.1335689340920791No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT880.12243818958440583No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT870.12104684652094667No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA860.1196555034574875No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAATATGGGCTGGGTGATCTATGTG830.11548147426711006No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA820.11409013120365087No Hit
CATAGATGGGATTATAGGTGTGAGCCACAGCGCCTGGCCAAAAATTTCCA820.11409013120365087No Hit
CATAGATGGGATTATAGGTGTGAGCCACCCCCGCCTGGCCAAAAATTTCC770.1071334158863551No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA740.10295938669597762No Hit
CATAGATGGGATTATAGGTGTGAGCCACTACGCCTGGCCAAAAATTTCCA720.10017670056905932No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)