FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30498
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA25818.462850022952324No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA20706.787330316742081No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA19486.3873040855138035No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT18586.092202767394584No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT13394.390451832907076No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG11023.6133516951931273No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA8282.7149321266968327No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG8042.63623844186504No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT7202.3608105449537673No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC6512.134566201062365No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACTGATACAGGAAGGCCT6352.0821037445078368No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGACTGATACAGGAAGGCCTTTC5971.9575054101908322No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC5751.885369532428356No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA4691.537805757754607No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG4041.3246770280018363No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG3681.206636500754148No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATAATCCTTTCCCTCACTCTCT3431.1246639123876976No Hit
CATAGACCTTTGGGTTCATATCATCTGGGTACACTGACTGATACAGGAAG3401.1148272017837235No Hit
CATAGACAGGGAGGCGTATAAGTGATGCACATAAATGACCTTCTCTTCTG3000.983671060397403No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2970.9738343497934291No Hit
CATAGAGCAACAGGGACTCTCATTCAGTGTTATCCCCAGAAATGTTAGCA2830.9279297003082169No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2750.9016984720309528No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACACCTGATTGGCCATTTGAA2640.8656305331497147No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG2610.8557938225457408No Hit
CATAGAGCTGGCTTCCTAACTTCCAATCTATGACAAGCAATGGGGAAAGG2600.8525149190110828No Hit
CATAGAGCAACAGGGACTCTCATTCAACACTGACTGATACAGGAAGGCCT2520.8262836907338187No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATCTACACAAGCAATGGGGAAA2470.8098891730605285No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTATCTGTTATTCAAAGGT2470.8098891730605285No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA2450.8033313659912125No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2450.8033313659912125No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA2440.8000524624565545No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT2180.7148009705554462No Hit
CATAGACCAATAAAAGTTGATGGGATGAACACAAGCAATGGGGAAAGGAT2030.6656174175355761No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT1940.636107285723654No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA1910.62627057511968No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT1630.5344612761492556No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA1610.5279034690799397No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC1550.5082300478719916No Hit
CATAGAGCTGCCTTCCTAACCATGGGCATATCTATGAGACCAAGTCTCTG1510.4951144337333595No Hit
CATAGAGCTGGCTTCCTAACTTCCAACATAGAGCTGCCTTCCTAACCATG1420.4656043019214374No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG1350.4426519771788314No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1190.39018952062430323No Hit
CATAGACAGGGAGGCGTATAAGTGATGTTCTACACATAGACAGGGAGGCG1130.37051609941635516No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCACACTGACTGATACAGGAAGG1100.36067938881238115No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG1050.34428487113909106No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1000.32789035346580103No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC1000.32789035346580103No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTTTCTACACATAGAAAACAGAGT950.311495835792511No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA940.308216932257853No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCCTTCCTAACCATGGGCATA920.301659125188537No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTGCTTCTTTCAAAAGTCTGGT900.2951013181192209No Hit
CATAGACAGGGAGGCGTATAAGTGATGTTCTACACATACTCAGGAGGCTG870.2852646075152469No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTATGTGCTTCTTTCAAAA830.27214899337661486No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA790.2590333792379828No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA740.24263886156469278No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCTACACATGGCTATGCAATCTAT700.22952324742606073No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT690.22624434389140274No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA610.20001311561413862No Hit
CATAGACAGAAACCACCCAGACAACCTACGGTTGCACAGATCATTTAAGC600.19673421207948064No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGCTA560.1836185979408486No Hit
CATAGATTGGAACTTTGCCAGCCTTCCTAACCATGGGCATATCTATGAGA550.18033969440619058No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACGACATGGTTCTA530.17378188733687455No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT480.1573873696635845No Hit
CATAGATTGGAACTTTGCCAGCCTTATACGGTAGCAGAATTACCTCTGGA470.1541084661289265No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGACGACATGGTTCTACACATAG470.1541084661289265No Hit
CATACTCAGGAGGCTGAGGCAGTCTATGAGACCAAGTCTCTGCTACCGTA470.1541084661289265No Hit
CATAGATCCTCTCATTGTCCAGTTTGGACACTGACGACATGGTTCTACAC450.14755065905961046No Hit
CATAGACAGAAACCACCCAGACAACCTTTCCCTCACTCTCTCCATCTATG450.14755065905961046No Hit
CATAGACAGGGAGGCGTATAAGTGATGGGGAAAGGATTCTATGAGACAAG390.1278772378516624No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC380.1245983343170044No Hit
CCTGATTGGCCATTTGAACTCTATGAGACCAAGTCTCTGCTACCGTATCT370.12131943078234639No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGGCGTATAAATGACCTTCTCT350.11476162371303036No Hit
CATAGATGTATACAAGCTGTCACAGACAACACACTGACGACATGGTTCTA340.11148272017837235No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTATCCCCAGAAATGTTAG320.10492491310905633No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACGTGGTTCTACA310.10164600957439832No Hit
CATAGATGTATACAAGCTGTCACAGACAACACCTGATTGGCCATTTGAAC310.10164600957439832No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)