FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804285

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804285
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30498
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA21126.925044265197718No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTCTATGTGTAGAACCATGTC20606.754541281395501No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA20226.629942947078497No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT17765.823332677552626No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT13014.265853498590071No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA11113.6428618270050492No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT8122.6624696701423045No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG7842.57066037117188No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT7682.518197914617352No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG6402.0984982621811263No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGGAAGTACACAAAAAGGGC5961.9542265066561741No Hit
CATAGAAAGGCCTTCCTGTATCAGTCACTGGGGACTGTGACTCTGTTTTC5741.882090628893698No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCATCACTTATACGCCTCCC5651.8525804970817759No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG4241.3902550986949964No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTATGCAAGACTAGGCAATTT3571.1705685618729096No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTACCCAGATGATATGAACCC3381.1082693947144073No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTATGCAAGACTAGGCAATTTAC3341.0951537805757754No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT3091.0131811922093252No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTATGTGCATCACTTATACGCC2980.9771132533280871No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2690.8820250508230049No Hit
CATAGACATGCTAACATTTCTGGGGATAACTTGGTCTCATAGACATGCTA2670.8754672437536889No Hit
CATAGACATGCTAACATTTCTGGGGATAACACTGAATGAGAGTCCCTGTT2650.8689094366843727No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG2630.8623516296150567No Hit
CATAGAGTTCAAATGGCCAATCAGGTGTCTCATAAATTCAACAGGCTTTC2600.8525149190110828No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATACGGGAGCAGGAATTAGACT2590.8492360154764247No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT2550.8361204013377926No Hit
CATAGAATCCTTTCCCCATTGCTTGTCATAGATTGGAAGTTAGGAAGCCA2530.8295625942684767No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTGAATGAGAGTCCCTGTTG2500.8197258836645026No Hit
CATAGACTGTCATTGCTTGCCCATTGTCATTGCTTGCTCATTATTATTGG2410.7902157518525805No Hit
CATAGAATCCTTTCCCCATTGCTTGTGTAGATGCAAGACTAGGCAATTTA2370.7771001377139484No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT2060.6754541281395502No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT2050.6721752246048921No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACATAGAGCAGGAATTAGACTC2030.6656174175355761No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACATCACTTATACGCC2010.65905961046626No Hit
CATAGAATCCTTTCCCCATTGCTTGTGTTCATCCCATCAACTTTTATTGG2010.65905961046626No Hit
CATAGACATGCTAACATTTCTGGGGATAACATTACTGGGGACTGTGACTC1910.62627057511968No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA1660.5442979867532297No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA1460.4787199160600695No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTCTATGTTGGAAGTTAGGAA1410.46232539838677944No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTCTGTTTTCTATGTGTA1370.4492097842481474No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT1340.43937307364417344No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG1230.4033051347629353No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG1150.3770739064856712No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGAGCAGGAATTAGACTCTT1140.37379500295101314No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA1020.33444816053511706No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA990.32461144993114305No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA980.321332546396485No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA970.318053642861827No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA930.304938028723195No Hit
CATAGACCAGACTTTTGAAAGAAGCACACTGGGGACTGTGACTCTGTTTT930.304938028723195No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTGGAAGTTAGGAAGCCAGC930.304938028723195No Hit
CATAGACCAGACTTTTGAAAGAAGCACATACGGGAGCAGGAATTAGACTC810.26559118630729883No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGGAAGTTAGGAAGCCAGCTCTA810.26559118630729883No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA780.2557544757033248No Hit
CATAGACATGCTAACATTTCTGGGGATACAGAGACTTGGTCTCATAGACA740.24263886156469278No Hit
CATAGATTGCATAGCCATGTGTAGCCAAACTGGACAATGAGAGGATCTAT710.2328021509607187No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCGTAGGTTGTCTGGGTGGTT690.22624434389140274No Hit
CATAGACATGCTAACATTTCTGGGGATACGGTAGTAGAGACTTGGTCTCA680.2229654403567447No Hit
CATAGACTGTCATTGCTTGCCCATTGTTTGGAAGTTAGGAAGCCAGCTCT640.20984982621811266No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAGAACCATGTCGTCAGTGT580.19017640501016458No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT580.19017640501016458No Hit
CATAGATATGCCCATGGTTAGGAAGGCTGGCAAAGTTCCAATCTATGTGT560.1836185979408486No Hit
CATAGATCTGCCCATGGTTAGGAAGGCAGCTCTATGTGTAGAACCATGTC500.16394517673290052No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT470.1541084661289265No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTATAAGGCTGGCAAAGTTC470.1541084661289265No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTACAAATCTATGTTAGAACCA460.1508295625942685No Hit
CATAGAGCAGGAATTAGACTCTTGACATCTATGTGTAGAACCATGTCGTC440.14427175552495244No Hit
CATAGACATGCTAACATTTCTGGGGATCTTGGTCTCATAGACATGCTAAC440.14427175552495244No Hit
CATAGATGGAGAGAGTGAGGGAAAGGTTGTCTGGGTGGTTTCTGTCTATG420.13771394845563642No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTCATAGAATCCTTTCCCCATCAC410.1344350449209784No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTACTG410.1344350449209784No Hit
CATAGAGTTCAAATGGCCAATCAGGTGTAGAACCATGTCGTCAGTGTAGA400.1311561413863204No Hit
CATAGAATCCTTTCCCCATTGCTTGTATACATCTATGTGTAGAACCATGT350.11476162371303036No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTATACGCCTCCATCACTTATA330.10820381664371434No Hit
CATAGACATGCTAACATTTCTGGGGATACATTACTGGGGACTGTGACTCT330.10820381664371434No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)