FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100410
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC1162211.574544368090828No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC80808.047007270192212No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA70977.0680211134349165No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG65716.544168907479335No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA51135.092122298575839No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA45494.53042525644856No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA39813.964744547355841No Hit
CATAGATCATGGGACTTCAGCATGGCCACATAGAGAGATTTTGGGCTGGA39033.887063041529728No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAGTCT31043.0913255651827507No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA29802.9678318892540587No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTTGGAGACAGCCGCTCA21042.0954088238223285No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTGCTTCTTTCAAAAGTCTGG19081.9002091425156857No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA17021.6950502937954388No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT15811.5745443680908275No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT13771.3713773528533015No Hit
CATAGATGTCCATCATGTGGAAGCTGCTTCCTTCTGCTGGCTATTCTATG11071.1024798326859875No Hit
CATAGATCATGGGACTTCAGCATGGCTATTCTATGAGACCAAGTCTCTGC9990.994920824619062No Hit
CATAGAGCCAAGGAAAGTTGAATGGATTCATACAAGCAATGGGGAAAGGA9840.9799820734986555No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC9770.9730106563091325No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCTATGTGTAGACCTGATTG8820.8783985658798924No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTGTGAGTTGCTGATG8550.851508813863161No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT7210.7180559705208645No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT6050.6025296285230555No Hit
CATAGATCATGGGACTTCAGCATGGCGACTTGGTCTCATAGAATCCTTTC5970.594562294592172No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC5650.5626929588686386No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT5320.5298277064037447No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT4570.455133950801713No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC4530.4511502838362713No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTGACTGATACAGGAAGG4390.4372074494572254No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTTTGGAGACAGCCGCTCAC4350.4332237824917837No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT4330.4312319490090628No Hit
CATAGAGAGATTTTGGGCTGAGACGACAAGCAATGGGGAAAGGATTCTAT4270.4252564485609003No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG4150.4133054476645752No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTACTACCGTAA4030.4013544467682502No Hit
CATAGAGCAACAGGGACTCTCATTCAACCTTCCTAACCATGGGCATATCT4010.39936261328552936No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTACCTGATTGGCCAT3880.38641569564784384No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG3640.36251369385519366No Hit
CATAGATCATGGGACTTCAGCATGGCCTTTCCCTCACTCTCTCCATCTAT3460.3445871925107061No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTAGCAGAATTACCTCTGGA3410.339607608803904No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTGGAGACAGCCGCTCAC3390.33761577532118314No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGAGACAGCCG2960.294791355442685No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG2850.2838362712877204No Hit
CATAGAAACCCCAAAGGCTATGTTCACACTGACGACATGGAGACAGCCGC2620.2609301862364306No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGACTCTGTTATTCAAAGGTTTT2580.256946519270989No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT2580.256946519270989No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA2480.2469873518573847No Hit
CATAGAAAACAGAGTCCCAGTCCCCAGTAATATCCCCAGAAATGTTAGCA2230.22208943332337416No Hit
CATAGATTCTGAAGAAATCAGATAGAGAGAAACTACGGTAGCAGAATTAC2180.21710984961657206No Hit
CATAGAGGATCCCATCTGAGTTGGTCTATGAGACCAAGTCTCTGCTACCG2140.21312618265113037No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA2030.20217109849616574No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT1950.19420376456528235No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA1910.19022009759984065No Hit
CATAGAGATGTTTGATAAGCAGGGTGATAGCAGAATTACCTCTGGATGGT1850.18424459715167812No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG1830.1822527636689573No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCTCTGCTACCATTTTCCCCCAA1720.17129767951399263No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGAGCTGCCTTCCTAACCATGGGCA1570.15635892839358628No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATCCACTGACTGATACAGGAAG1500.14938751120406335No Hit
CATAGATCATGGGACTTCAGCATGGCTACACTGACGACATGGTTCTACAC1450.14440792749726122No Hit
CATAGATCATGGGACTTCAGCATGGCTGACGACATGGTTCTACACATAGA1430.1424160940145404No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1320.13146100985957573No Hit
CATAGATCCTCTCATTGTCCAGTTTGGACACTGACTGATACAGGAAGGCC1220.12150184244597152No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1160.11552634199780898No Hit
CATAGATCCCATCCAATAATAATGAGCATGGTTCTACACATAGATCCCAT1140.11353450851508815No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT1130.11253859177372773No Hit
CATAGATCATGGGACTTCAGCATGGCGACAGCCGCTCACCTCTATGAGAC1120.11154267503236728No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTAGCAGAATTACCTCTG1010.10058759087740266No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)