FastQCFastQC Report
Wed 8 May 2024
EGAF00005804321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences166967
Total Bases25 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG104106.234764953553696No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT95175.699928728431367No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT74114.4386016398449994No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG67854.063677253589033No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT52133.122173842735391No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT50193.0059832182407304No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT47232.8287026777746505No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT38802.3238124898932124No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG38462.303449184569406No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT36352.177076907412842No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT30251.8117352530739608No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT28341.6973413908137538No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT22701.3595500907364928No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT21031.259530326351914No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG19261.1535213545191565No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGCTTTTACAAACTCAAGT19101.143938622602071No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG18971.1361526529194392No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT17831.0678756880102056No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT17181.028945839597046No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCTGCTTTTACAAACTCAAGT17141.0265501566177746No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG16701.00019764384579No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG16530.9900159911838867No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT14620.8756221289236796No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT13840.8289063108278881No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG13480.8073451640144459No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT13180.7893775416699108No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG12910.7732066815598292No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT12530.7504476932567513No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG12480.7474530895326621No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG11810.707325399629867No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT11710.7013361921816886No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC10460.6264710990794589No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT9980.5977229033282027No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC9920.5941293788592955No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC9770.585145567687028No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC9630.5767606772595782No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA9450.5659801038528571No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA8800.5270502554396977No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT8400.5030934256469841No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT7550.45218516233746786No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT7260.4348164607377506No Hit
CATAGAGGCCCAGGAGAGTTGCTTAAGAAAGAAAACCCACAAAAGACGTC7140.4276294117999365No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTATCTTCTGCTGCACTGCTCTAT7070.4234369665862116No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG6930.4150520761587619No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT6670.39948013679349814No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC6660.3988812160486803No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA6480.38810064264195915No Hit
CATAGAAAAGGGAGGGATTACGGGTGCTGCTGAAGGATAGTTGGGTGCTC6390.38271035593859865No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6300.3773200692352381No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG6180.370133020297424No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT5770.34557726975989267No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC5770.34557726975989267No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT5270.3156312325190007No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTCACGATGGTATTACATGGT5170.30964202507082234No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGAAAGAAAACCCACAAAAGACGT5120.3066474213467332No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT4980.29826253091928345No Hit
CATAGAGGCCATTCTTCTCATGCTGGCATTCTTTCTCCAGACCTTCATCT4820.28867979900219803No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT4810.2880808782573802No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT4750.2844873537884732No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGACACTTGAAAGCTCCCTGGATC4570.2737067803817521No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4530.2713110974024807No Hit
CATAGACTTGTTGCCGAGACTGGAGTATAATCTGCTTTTACAAACTCAAG4500.26951433516802725No Hit
CATAGAACCAACCAATAATAATGTGCTTGTATTATGGGTCCCAAAGTAGG4320.25873376176130614No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT4250.2545413165475813No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATGCCAAGTAAGTCTACAAAGAA4210.2521456335683099No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT4170.24974995058903854No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTAATGTTTGCTATTACG4040.24196398090640664No Hit
CATAGACAATTTCAGTGCGGCCGATGCATGTCTAGATGTGGTTGCATGGG4030.2413650601615888No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG4000.2395682979271353No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCTCTTCACCTCCCAGATCTATG3940.23597477345822826No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3830.22938664526523206No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3800.22758988303077854No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3730.22339743781705368No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTGCTAACTTCGCCTGCC3720.2227985170722358No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3700.22160067558260016No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC3670.21980391334814664No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3670.21980391334814664No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT3650.21860607185851094No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3600.21561146813442178No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC3600.21561146813442178No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC3480.2084244191966077No Hit
CATAGAAGGGGTGATGCTCTGATGGACAGGGGTGTGGTGTTCTGTCTATG3310.19824276653470446No Hit
CATAGATCTACTCCTACAATCTTGGCAAAAGGGTCCAAGGTCAAGGGCAG3220.19285247983134393No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT3210.19225355908652608No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC3180.19045679685207256No Hit
CATAGACCAGGACAATCACAGGGCACTCATAGATGTGGTTGCATGGGGGT3030.181472985679805No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG3030.181472985679805No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG2890.17308809525235527No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAGGTGGCTTCTGGTGCATCTATG2720.162906442590452No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTTCAAGTGCACAGTTTG2700.16170860110081633No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTTTCCCACCGCCCTTTTCT2670.15991183886636282No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT2660.15931291812154497No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG2640.1581150766319093No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA2610.15631831439745578No Hit
CATAGACACTTGACCATGCCCTTGTTGACACTTGAAAGCTCCCTGGATCT2560.1533237106733666No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGACAGGGGTGTGGT2510.1503291069492774No Hit
CATAGAAAAGGGAGGGATTACGGGTGCCAAGTAAGTCTACAAAGAACCTC2460.1473345032251882No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC2410.14433989950109902No Hit
CATAGATGGCCCACTGACATTTTCCTTCTCTGACACCGGCGTGTATGTGA2390.14314205801146335No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2370.14194421652182768No Hit
CATAGATGGCCCACTGACATTTTCCTTCATAGACACTTGAAAGCTCCCTG2310.13835069205292064No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGAACGAAATTTAGGT2260.13535608832883145No Hit
CATAGAAAAGGGAGGGATTACGGGTGTACGGTAGCAGACACTTGAAAGCT2130.12757011864619955No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT2070.12397659417729251No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTTCTACACATAGATGTGGTTGC2000.11978414896356765No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGCTCATAGACAGGGGTGTGG1990.11918522821874981No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC1960.11738846598429631No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTGAAGGATAGTTGGGTGC1940.11619062449466062No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1930.11559170374984278No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAATTCGCTATCTTCTGCTGCACTG1910.11439386226020709No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1910.11439386226020709No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTACGGTAGCAGACACTTGA1900.11379494151538927No Hit
CATAGAACATCTCCCTGTTCCTCCCAGAGTGGGAGTCATTCATGATCTAT1880.11259710002575359No Hit
CATAGATCTACTCCTACAATCTTGGCAAAAGGGCCAAGGTCAAGGGCAGG1860.1113992585361179No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1840.11020141704648224No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGTCTATAGATGTGGTTGCATGGGG1840.11020141704648224No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1740.10421220959830385No Hit
CATAGACACTTGACCATGCCCTTGTTCATCCCAGTTAGGCTACTTGGGGG1690.10121760587421466No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCACAGGACATTGGGGAATTC1690.10121760587421466No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1670.10001976438457898No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)