FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804328

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804328
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15053
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA175611.665448747757921No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA10967.2809406762771545No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA10006.643194047698134No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT9616.384109479837906No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT6384.238357802431409No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG4643.082442038131934No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC3512.3317611107420446No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG3462.298545140503554No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACTGATACAGGAAGGCCT2971.9730286321663455No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC2601.7272304524015145No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA2161.4349299143027967No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2111.4017139440643063No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1981.3153524214442305No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG1941.2887796452534377No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT1811.2024181226333621No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1691.1226997940609846No Hit
CATAGAGAGATTTTGGGCTGAGACGAAGTCTCTGCTACCATACGTGAATG1480.9831927190593238No Hit
CATAGACACCATGCCTGGCTAATTTTACACTGACTGATACAGGAAGGCCT1430.949976748820833No Hit
CATAGATGCCCTTTTTGTGTACTTCCATACGTGAATGTGGATCAGAACTT1390.9234039726300405No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC1260.8370424500099649No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA1240.8237560619145686No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC1170.7772537035806816No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGGAGACAGCCGCTCACCTCTA1130.750680927389889No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG1130.750680927389889No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATGTGTTGATTGTGTTATTGGT1110.7373945392944928No Hit
CATAGACAGGGAGGCGTATAAGTGATGTAGACAGGGAGGCGTATACGTGA1030.6842489869129077No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC980.651033016674417No Hit
CATAGAGGATCCCATCTGAGTTGGTCACACTGACTGATACAGGAAGGCCT950.6311034345313227No Hit
CATAGATCCTCTCATTGTCCAGTTTGGATAGAGCAGAATTACCTCTGGAT890.5912442702451339No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCTGACAAGCAATGGGGAAAGGATT870.5779578821497375No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATTGTTAGCATGTCTATCCCC830.5513851059589451No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA810.5380987178635488No Hit
CATAGAGCAACAGGGACTCTCATTCAAAATGGTCAAACAGGAGGTCTATG740.4915963595296619No Hit
CATAGAACTTCACAAGGGCTTTAGGGCACTGACTGATACAGGAAGGCCTT730.48495316548196377No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCCTTCCTAACCATGGGCATA710.4716667773865675No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT700.4650235833388693No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA670.44509400119577497No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTACGGTTGCACAGATCATTT650.43180761310037863No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGCTTCCTTCTGCTGGC580.38530525476649174No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA560.37201886667109546No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA560.37201886667109546No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGAGACAGCCG560.37201886667109546No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTACAATGGGCAAGCAATG540.3587324785756992No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC520.34544609048030295No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA520.34544609048030295No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAACAATGGGCAAGCAATGACAGT520.34544609048030295No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA500.33215970238490666No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGATCC500.33215970238490666No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGGTGTTGATTGTGTTA490.3255165083372085No Hit
CATAGATCCCATCCAATAATAATGAGCACAAAGTCACGAAAGTGGGTCTA490.3255165083372085No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATATCCCCAGAAA480.3188733142895104No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT470.3122301202418123No Hit
CATAGACAGGGAGGCGTATAAGTGATGACATGGTTCTACACATACTCAGG460.3055869261941141No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG460.3055869261941141No Hit
CATAGAGGATCCCATCTGAGTTGGTCTTCTACACACATAGAGCAGAATTA440.29230053809871787No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTCTGT440.29230053809871787No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAA430.2856573440510197No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT430.2856573440510197No Hit
CATAGATGTCCATCATGTGGAAGCTGCACTGACGACATGGTTCTACACAT390.2590845678602272No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCTACACATGGCTATGCAATCTAT380.25244137381252907No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCACCT370.24579817976483095No Hit
CATAGATCCCATCCAATAATAATGAGCAGGAATTAGGTGTTGATTGTGTT360.2391549857171328No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG360.2391549857171328No Hit
CATAGAAAACAGAGTCACAGTCCCCAGAAATGTTAGCATGTCTATGAGAC340.22586859762173656No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT340.22586859762173656No Hit
CATAGAGATGTTTGATAAGCAGGGTGAATGTGGATCAGAACTTCTATGAG330.2192254035740384No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGACTGATACAGGAAGGCCTT320.21258220952634024No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA300.199295821430944No Hit
CATAGAGCTGGCTTCCTAACTTCCAACATAGAGCTGCCTTCCTAACCATG290.19265262738324587No Hit
CATAGAGCTGGCTTCCTAACTTCCAACTGCCTTCCTAACCATGGGCATAT270.1793662392878496No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT270.1793662392878496No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTCGACAAGCAATGGGGAAAGG270.1793662392878496No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG260.17272304524015147No Hit
CATAGACAGAAACCACCCAGACAACCTCCTTTCCCTCACTCTCTCCATCT240.1594366571447552No Hit
CATAGAGGATCCCATCTGAGTTGGTCATCTGTGCTGGCTTGACTTTTCAT240.1594366571447552No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACAATCCCCAGAAATGTTAGC230.15279346309705705No Hit
CATAGATGCCCTTTTTGTGTACTTCCATACTGACGACATGGTTCTACACA230.15279346309705705No Hit
CAAAGTCACGAAAGTGGGTCTATGAGACCAAGTCTCTGCTACCGTATGCA220.14615026904935893No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT220.14615026904935893No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA220.14615026904935893No Hit
CATAGATGTATACAAGCTGTCACAGACAACAACAATGGGCAAGCAATGAC210.13950707500166082No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACATAGATGCCCTTTTTGTGTG200.13286388095396265No Hit
CATAGATCATGGGACTTCAGCATGGCCTTCCTAACCATGGGCATATCTAT200.13286388095396265No Hit
CATAGACCTGGGCTTAGGGGCTATACTCAGGAGGCTGAGGCAGTCTATGA180.1195774928585664No Hit
CATAGACAGGGAGGCGTATAAGTGATGTACGGTAGCAGAATTACCTCTGG170.11293429881086828No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATGCCTTCCTAACCATGGGCAT160.10629110476317012No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATCGACATGGTTCTACACATAC160.10629110476317012No Hit
CATAGATTGGAACTTTGCCAGCCTTTCCCTCACTCTCTCCATCTATGAGA160.10629110476317012No Hit
CATAGACAGGGAGGCGTATAAGTGATACGTGAATGTGGATCAGAACTTCT160.10629110476317012No Hit
CATACTCAGGAGGCTGAGGCAGTCTATGAGACCAAGTCTCTGCTACCGTA160.10629110476317012No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)