FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804329

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804329
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15053
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG184512.256693018003057No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA10827.18793595960938No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA9586.364179897694812No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT9176.091808941739188No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT6284.171925861954428No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA4693.1156580083704246No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG3452.291901946455856No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGGAAGTACACAAAAAGGGC3011.9996014083571383No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC2591.7205872583538167No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT2101.395070750016608No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG1991.3219956154919286No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT1981.3153524214442305No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT1851.2289908988241547No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1661.1027702119178902No Hit
CATAGAAGTTCTGATCCACATTCACGTATGGTAGCAGAGACTTCGTCTCA1480.9831927190593238No Hit
CATAGAAGTTCTGATCCACATTCACGTATGGAAGTACACAAAAAGGGCAT1400.9300471666777386No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAAAATTAGCCAGGCATGGT1340.8901880023915499No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT1290.8569720321530592No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA1240.8237560619145686No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT1200.797183285723776No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT1170.7772537035806816No Hit
CATAGAGGTGAGCGGCTGTCTCCAACCCCTTAAGAAAATTTAATTGTCTA1130.750680927389889No Hit
CATAGACATGCTAACATTTCTGGGGATATAGCAGAGACTTGGTCTCATAG1120.7440377333421909No Hit
CATAGACCCTTACCAATAACACAATCAACACATGCAAGACTAGGCAATTT1100.7307513452467946No Hit
CATAGAAGTTCTGATCCACATTCACGTATACGCCTCCCTGTCTACATCAC1010.6709625988175115No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCATCACTTATACGCCTCCC980.651033016674417No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGACCAACTCAGATGGGATC920.6111738523882282No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTGGAA910.6045306583405301No Hit
CATAGACCATCCAGAGGTAATTCTGCTCTATCCAAACTGGACAATGAGAG880.5846010761974357No Hit
CATAGAATCCTTTCCCCATTGCTTGTCAGAACTTTGCCCCAAAAGAGGTT860.5713146881020394No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA810.5380987178635488No Hit
CATAGACATGCTAACATTTCTGGGGATAGACATGCTAACAATTACTGGGG790.5248123297681526No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGCCCTAAAGCCCTTGTGAAGT750.49823955357735994No Hit
CATAGACCTCCTGTTTGACCATTTTGAATGAGAGTCCCTGTTGCTCTATG730.48495316548196377No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA690.45838038929117114No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCAACTCAGATGG690.45838038929117114No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTGGAAGTTAGGAAGCCAGC680.4517371952434731No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG680.4517371952434731No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCGTACAACCCCTTAAGAAAA640.4251644190526805No Hit
CATAGAATAGCCAGCAGAAGGAAGCATCTATGAGACCAACTCAGATGGGA580.38530525476649174No Hit
CATAGACTGTCATTGCTTGCCCATTGTACGGGAGCAGGAATTAGACTCTT540.3587324785756992No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTCGTCAGTGTGCCATGCTGAAGTC540.3587324785756992No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA540.3587324785756992No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA530.3520892845280011No Hit
CATAGACCCACTTTCGTGACTTTGTGCTCATTATTATTGGATGGGATCTA530.3520892845280011No Hit
CATAGACATGCTAACATTTCTGGGGATAACATTACTGGGGACTGTGACTC530.3520892845280011No Hit
CATAGACATGCTAACATTTCTGGGGATATTACTGGGGACTGTGACTCTGT480.3188733142895104No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTGTGTGTAG480.3188733142895104No Hit
CATAGACATGCTAACATTTCTGGGGATCATAGACATGCTAACATTACTGG480.3188733142895104No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCATCACTTA470.3122301202418123No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAGAGACTTGGTCTCATAGAGCA470.3122301202418123No Hit
CATAGACCCTTACCAATAACACAATCAACACCTCATAGAGCAGGAATTAG460.3055869261941141No Hit
CATAGACCATCCAGAGGTAATTCTGCTCTATGTGTGTAGAAGACCAACTC460.3055869261941141No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGAAGTTAGGAAGCCAGCT460.3055869261941141No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT450.298943732146416No Hit
CATAGACATGCTAACATTTCTGGGGATATGCTAACATTACTGGGGACTGT450.298943732146416No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG420.27901415000332164No Hit
CATAGATTGCATAGCCATGTGTAGCCAAACTGGACAATGAGAGGATCTAT420.27901415000332164No Hit
CATAGACCCTTACCAATAACACAATCAACACCTAATTCCTGCTCATTATT400.2657277619079253No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA390.2590845678602272No Hit
CATAGACATGCTAACATTTCTGGGGATTCTCATAGACATGCTAACATTAC390.2590845678602272No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG360.2391549857171328No Hit
CATAGACCAGACTTTTGAAAGAAGCACATGGAAGTACACAAAAAGGGCAT350.23251179166943464No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT340.22586859762173656No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAAGGCTGGCAAAGTTCCAA320.21258220952634024No Hit
CATAGAAGTTCTGATCCACATTCACGTATGTCTCATAGAAGTTCTGATCC310.20593901547864216No Hit
CATAGACATGCTAACATTTCTGGGGATACGGTAGCAGAGATTTGGTCTCA300.199295821430944No Hit
CATAGAATCCTTTCCCCATTGCTTGTCGACATGGAAGTACACAAAAAGGG270.1793662392878496No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT260.17272304524015147No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTCTATGTTGGAAGTTAGGAA260.17272304524015147No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA240.1594366571447552No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTAGAT240.1594366571447552No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAGGTTGTCTGGGTGGTTTCTGTCT240.1594366571447552No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGTTGTCTGTGACAGCTTGTATA240.1594366571447552No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA230.15279346309705705No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTGGGGACTGTGACTCTG220.14615026904935893No Hit
CATAGACTGTCATTGCTTGCCCATTGTTTGGAAGTTAGGAAGCCAGCTCT220.14615026904935893No Hit
CATAGATGAAAAGTCAAGCCAGCACAGATGACCAACTCAGATGGGATCCT220.14615026904935893No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGTTGGAAGTTAGGAAGCCAGCT220.14615026904935893No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGGAAGTTAGGAAGCCAGCTCTA220.14615026904935893No Hit
CATAGATATGCCCATGGTTAGGAAGGCCATGCTGAAGTCCCATGATCTAT200.13286388095396265No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTGG190.12622068690626453No Hit
CATAGACTGCCTCAGCCTCCTGAGTATAGCCCCTAAGCCCAGGTCTATGT190.12622068690626453No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTACATCACTTATACGCCTC170.11293429881086828No Hit
CATAGATATGCCCATGGTTAGGAAGGCATGCAAGACTAGGCAATTTACAA170.11293429881086828No Hit
CATAGATGGAGAGAGTGAGGGAAAGGCTGGCAAAGTTCCAATCTATGTGT170.11293429881086828No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTCTATGTGTAGAACCATGTC170.11293429881086828No Hit
CATAGAAGTTCTGATCCACATTCACGTATCACTTATACGCCTCCCTGTCT160.10629110476317012No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)