FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804330

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804330
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137673
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3531125.64845685065336No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC85276.193661792798879No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC39902.8981717548103116No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT39072.8378839714395707No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC30522.216847166837361No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA25971.8863538965519746No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA22721.6502872749195558No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA22021.5994421564141117No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA21781.582009544355102No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT21491.5609451381171326No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACTGATACAGGAAGGCCT19591.4229369593166417No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA17801.2929187277098633No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA15251.1076972245828884No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA14301.038693135182643No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT12920.9384556158433388No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA12400.900684956382152No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA12080.877441473636806No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT11580.8411235318472031No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA9860.7161898120909692No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT9220.6697028466002775No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT9080.6595338228991886No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG8800.639195775497011No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG6560.47649139627959003No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG5180.37625387694028606No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA5050.3668112120749893No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT5020.3646321355676131No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC4900.35591582953810846No Hit
CATAGATCATGGGACTTCAGCATGGCTGGAGACAGCCGCTCACCTCTATG4680.3399359351506831No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA4490.32613511727063405No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATCTGTTATTCAAAGGTTTT4290.3116079405547929No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG4250.3087025052116246No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT3870.28110086945152646No Hit
CATAGATCATGGGACTTCAGCATGGCTAAATGATCTATCCAGGAATTTTA3790.27528999876519No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT3640.26439461622830907No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTCAATGGGCAAGCAATG3450.25059379834826No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT3290.23897205697558707No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA2830.20555955052915242No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG2460.17868427360484626No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2200.15979894387425275No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA2200.15979894387425275No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA2190.1590725850384607No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2140.1554407908595004No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCCGTCTCTA2130.15471443202370835No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA2110.15326171435212424No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA1980.14381904948682747No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA1950.1416399729794513No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATTATCCCCAGAAATGTTAGC1910.13873453763628307No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT1900.13800817880049102No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1880.1365554611289069No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCTGTCTCTA1800.13074459044257045No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACCCTTCCTAACCATGGGCATATC1780.1292918727709863No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1780.1292918727709863No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACAGTGAAACCCCATCTCTA1730.12566007859202605No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG1730.12566007859202605No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1690.1227546432488578No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC1690.1227546432488578No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1680.12202828441306574No Hit
CATAGATGCCCTTTTTGTGTACTTCCAGGCACGAGTTCTCCTCTGTCCTG1680.12202828441306574No Hit
CATAGATCATGGGACTTCAGCATGGCTAACATGGTGAAACCCCATCTCTA1660.12057556674148164No Hit
CATAGATTGGAACTTTGCCAGCCTTACCTGATTGGCCATTTGAACTCTAT1640.11912284906989751No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCTGTCTCTA1630.11839649023410545No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGGAACCCTGTCTCTA1620.11767013139831341No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA1620.11767013139831341No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTGGAGACAGCCGCT1600.11621741372672928No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1590.11549105489093722No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCATCTCTACTAAAAATA1580.11476469605514515No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1560.11331197838356105No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACCCCATCTCTA1550.112585619547769No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1540.11185926071197692No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA1510.10968018420460075No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGAGAAACCCCATCTCTA1510.10968018420460075No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1510.10968018420460075No Hit
CATAGAGAGATTTTGGGCTGAGACGAATAGAATCCTTTCCCTCACTCTCT1490.10822746653301664No Hit
CATAGATGAAAGCCTGTTGAATTTATGAACACTGACTGATACAGGAAGGC1480.1075011076972246No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA1480.1075011076972246No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA1460.10604839002564047No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGACAAAATACCACCTCCA1440.10459567235405634No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT1440.10459567235405634No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1410.10241659584668018No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1400.10169023701088811No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1390.10096387817509606No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTGGAGA1380.10023751933930401No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT1380.10023751933930401No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)