FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences182124
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4960027.23419208890646No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG104075.714238650589708No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG73504.035711932529486No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA60533.3235597724627177No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC57533.158836836441106No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA42482.332476774066021No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC37332.0497024005622544No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG36532.0057762842898246No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT25101.378181898047484No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG22961.2606795370187345No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG19401.065208319606422No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC17720.9729634754343195No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA16930.929586435615295No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA15380.8444795853374624No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC12870.706661395532714No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA11690.6418703740308801No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC11260.6182600865344491No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT10810.5935516461312073No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG10760.5908062638641804No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA10260.5633524411939118No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA10040.5512727592189937No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA9680.5315060068964003No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT9330.5122883310272122No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC8600.4722057499286201No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGACAGCCGCTCACCTCTA8260.4535371505128374No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGTGCAGCTATATTGGAGGAA8110.4453010037117568No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA7840.4304759394698118No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG7760.4260833278425688No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT7660.420592563308515No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA7150.3925896641848411No Hit
CATAGATCAACAATGGATGAGCAAAAGGGATTATCAGTAGTGCTCACATC7080.38874612901100347No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC7060.3876479761041927No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCAGTTTTTCCAAATATAAGAT6460.3547033888998704No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA6190.3398783246579254No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG5940.3261514133227911No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC5900.32395510750916956No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGGCTAGTCCGTCACCCCTAAT5300.29101052030484725No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTATAGCCAGTGTCTCCCCTCTATG5130.2816762205969559No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCAGTGCAGCTATATTGGAGGAA5120.28112714414355056No Hit
CATAGATCAACAATGGATGAGCAAAAGGTCTATGAGCATGTTGAGATGAA5120.28112714414355056No Hit
CATAGACCATTTGCCGCGTTCTGAAGCTCTATGGAGGGAAGGAAGGGCAA4880.26794930926182164No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGCATGTTGAGATGAATAA4820.2646548505413894No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT4800.2635566976345787No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC4790.26300762118117327No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGAGGAGGGAAGGAAGGGCAA4760.26136039182095716No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGAAAGCAATCACCGCCA4730.25971316246074105No Hit
CATAGATCACCTACACAGACAGCTTTCCTAATAGTTTTTCCAAATATAAG4450.24433902176539063No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA4370.2399464101381476No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGCATGTTGAGATGAATAATTG4190.23006303397685093No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA4150.22786672816322945No Hit
CATAGATCACCTACACAGACAGCTTTCCTACGGGGGCAGATTAACAGGTC4150.22786672816322945No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA4100.22512134589620256No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT4090.2245722694427972No Hit
CATAGATGTGCCTCTCCAACATTCATGAGACCAAGTCTCTGCTACCGTAC4020.2207287342689596No Hit
CATAGATCAACAATGGATGAGCAAAAGGGAGGGAAGGAAGGGCAAACTCT3730.2048055171202038No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATACGGGGGCAGATTAACAG3630.19931475258615008No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGAGCAGAGTTGGGTGTGTC3550.19492214095890711No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC3410.1872350706112319No Hit
CATAGACACCTGGATCCTGTGTTGTCTTAGGTAGAGGAGTTTCAAACATC3400.18668599415782655No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG3050.1674683182886385No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA3020.1658210889284224No Hit
CATAGATGTGGCTATGCAGACTGAGTCTCTGCTACCGTACCATGGGTCCT2940.16142847730117943No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGGGAGGGAAGGAAGGGCAAA2870.1575849421273418No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGCTAGTCCGTCACCCCTAAT2830.15538863631372032No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGCATGTTG2810.15429048340690957No Hit
CATAGATGTGGCTATGCAGACTGAGTGCAGCTATATTGGAGGAAAAGTCT2800.1537414069535042No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCTAATAGTTTTTCCAAATATA2790.15319233050009884No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA2780.15264325404669346No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGGGGCAGATTAACAGGTCAT2690.1477015659660451No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT2610.14330895433880214No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGGAGGGAAGGAAGGGCAAAC2510.13781818980474841No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCTTCTTATAGCCAGTGTCTCCCC2450.13452373108431617No Hit
CATAGATCATGCAAAGAACACAGGCCCCACCCTTATGATCGTATCTATGA2430.13342557817750544No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC2420.13287650172410007No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCGGATTCAGGAGGGAAGGAAG2410.1323274252706947No Hit
CATAGATCACCCAGGTAATCACTAGGTGATCTTAGGTAGAGGAGTTTCAA2410.1323274252706947No Hit
CATAGAGGTCGCAGCTACCCAGAAAGGCAGATCATGAGGTCAGGTCTATG2360.12958204300366785No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2300.12628758428323558No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA2290.12573850782983023No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGCAATCACCGCCA2130.11695328457534428No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT2130.11695328457534428No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG2090.11475697876172279No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2080.11420790230831741No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTACTCTTAGT2030.11146252004129054No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG2030.11146252004129054No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCGCACCCTGAAGTTTGAGAGC1990.10926621422766905No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA1980.10871713777426369No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1960.10761898486745294No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGGAAGGAAGGGCAAACT1940.1065208319606422No Hit
CATAGATTCTCAGAGGTTCAATTTGGTTTTGTCTTAGGTAGAGGAGTTTC1830.10048099097318311No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)