FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804333

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804333
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences182124
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4933327.087588675847226No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG104435.7340054029123015No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG79964.390415321429356No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT60933.3455228305989326No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC55763.061650304188355No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA43322.3785991961520723No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG37112.037622718587336No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG35361.941534339241396No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA32031.758691880257407No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT25071.376534668687268No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG22431.2315784849882498No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG17630.9680217873536712No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA11670.6407722211240694No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC11430.6275943862423403No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG11000.6039840987459094No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT10600.5820210406096945No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT10310.5660978234609387No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC9760.5358986185236433No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC9530.5232698600953197No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT9470.5199754013748874No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT9090.4991104961454833No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC8620.47330390283543083No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTACTTGGCCTCAGTTTCCCCT8240.4524389976060267No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA8150.4474973095253783No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA8000.4392611627242977No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG7650.42004348685510967No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG7460.4096110342404076No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA7280.399727658079111No Hit
CATAGATGTGAGCACTACTGATAATCCCTTTTGCTCATCCATTGTTGATC7170.39368781709165185No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA7030.38600074674397666No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGGTAGCAAAGCTGCT6480.35580154180668117No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT6320.3470163185521952No Hit
CATAGACCAAACACAGAAGACATGGCAAAGCTGCTATGGGATCTTCTATG5800.3184643429751159No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA5420.29759943774571174No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCATAGACCTTTTGCTCAT5410.29705036129230633No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGGGAGACACTGGGGGCACAA5210.2860688322241989No Hit
CATAGAGGGGAGACACTGGCTATAAGAAATACCTGGGCGACCTCTCTATG5200.2855197557707935No Hit
CATAGATTAGGGGTGACGGACTAGCCACTTGGCCTCAGTTTCCCCTCCTT5190.2849706793173882No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGATGTTTTAAAATGAGCA5000.2745382267026861No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCATAGAGCTTCAGAACGCGGCAAAT4800.2635566976345787No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTCGGTAGCAAAGCTGCTATGGGAT4690.25751685664711954No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC4690.25751685664711954No Hit
CATAGACTGGCGGTGATTGCTTTCCTGATGTTTTAAAATGAGCACCTAAC4670.2564187037403088No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG4570.2509279392062551No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGGAAAGCTGTC4510.24763348048582284No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT4370.2399464101381476No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC4200.2306121104302563No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTTGGCCTCAGTTTCCCC4180.22951395752344558No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAGGAAAGCTGTCTGTGTAGGTG4170.22896488107004018No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT4160.22841580461663483No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA4020.2207287342689596No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA3950.21688519909512202No Hit
CATGAATGTTGGAGAGGCACATCTATGTGTAGAACCATGTCGTCAGTGTA3700.2031582877599877No Hit
CATAGATGACCTGTTAATCTGCCCCCGTATTTGAGGTAAAACTATTAGCG3680.20206013485317698No Hit
CATAGACACACCCAACTCTGCTCAGTGTACCAGTGTAGCAGACCATCTTC3540.19437306450550174No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACAACACAGGATCCAGGTGTC3490.19162768223847487No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTTTGCTCATCCATTGTTGATCT3430.18833322351804266No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG2970.16307570666139554No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC2930.16087940084777405No Hit
CATAGATGATGTGAAAAGGACCCATGGTACGGTAGCAGAGACTCAGTCTG2910.1597812479409633No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGGGAAGTAGGG2850.15648678922053105No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCAGTCTGCATAGCCACATCT2840.15593771276712567No Hit
CATAGATTAGGGGTGACGGACTAGCCATCAATTTAAGGTAGGCACTTCCT2830.15538863631372032No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCCATCAATTTAAGGTAGGCACTTC2790.15319233050009884No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT2770.15209417759328808No Hit
CATAGATGACCTGTTAATCTGCCCCCATCAATTTAAGGTAGGCACTTCCT2740.15044694823307198No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA2570.14111264852518063No Hit
CATAGATACGATCATAAGGGTGGGGCCTGTGTTCTTTGCATGATCTATGT2540.13946541916496452No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGATCACCTAGTGATTACCTGGG2470.13562188399112693No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2470.13562188399112693No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCATCAATTTAAGGTAGGCACTTCC2460.13507280753772155No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA2450.13452373108431617No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGAGACACTGGGGGCACAAAGT2430.13342557817750544No Hit
CATAGACCTGACCTCATGATCTGCCTTTCTGGGTAGCTGCGACCTCTATG2400.13177834881728934No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGAATCCGGGAAGTAGGGAATGAT2350.12903296655026245No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA2290.12573850782983023No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA2250.12354220201620875No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA2220.12189497265599261No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT2200.12079681974918187No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2170.11914959038896576No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAAGCTGCTATGGGATC2090.11475697876172279No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2080.11420790230831741No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2030.11146252004129054No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG1970.10816806132085831No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCGGGAAGTAGGGAATGATTAC1950.10706990841404757No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA1940.1065208319606422No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG1900.10432452614702072No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAAGCTGCTATGGGATCTT1900.10432452614702072No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1850.10157914387999385No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1830.10048099097318311No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACAAAACCAAATTGAACCTCT1830.10048099097318311No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1830.10048099097318311No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)