FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804335

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804335
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96790
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2099221.68819092881496No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT92419.547473912594276No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG57815.972724455005682No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG47914.949891517718773No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG42174.356855047008989No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC38123.9384233908461614No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG28992.995144126459345No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT21652.2368013224506664No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG19101.973344353755553No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA18461.9072218204359954No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG18101.8700278954437444No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT16561.7109205496435582No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT15591.6107035850811036No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA11031.139580535179254No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC10101.0434962289492717No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA9270.95774356855047No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC6810.7035850811034198No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT5660.5847711540448394No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG5210.5382787478045252No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC5030.5196817853083996No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT4910.5072838103109825No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT4510.46595722698625885No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT4330.4473602644901333No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT4080.421531149912181No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGTCGTCAGTGTACCA3930.40603368116540967No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA3840.3967351999173468No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG3420.353342287426387No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA3380.3492096290939147No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG3340.3450769707614423No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG3330.3440438061783242No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGCAGAGACTTGGTCTCATAG3120.3223473499328443No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT2610.26965595619382166No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG2460.25415848744705033No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG2210.22832937286909805No Hit
CATAGAGGTGAGCGGCTGTCTCCATGGTGACCGGGCTGCACACTGGACTT2160.22316354995350762No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG2140.2210972207872714No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT2100.21696456245479906No Hit
CATAGACCCCATGACTCAGCTCCTCATTCTAAAAAAGAACGATGAAATAC1990.20559975204050007No Hit
CATAGATCTAGCCCATCACTTCAGCATCATGCAGGCCCTTCAGCATCATT1880.19423494162620103No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG1870.19320177704308297No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT1870.19320177704308297No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGACAGTTGTGGAAAGTGCAAT1790.18493646037813824No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCGCAGGCCCTTCAGCATC1750.18080380204566587No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1700.17563797913007542No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG1650.17047215621448497No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCACTCTCCCACCATTCAGACT1570.16220683954954024No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGC1500.15497468746771362No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATAACAACAACAAAACT1460.15084202913524122No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGG1420.14670937080276888No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTGGTGCTGGAATAGTTGGACT1380.14257671247029652No Hit
CATAGACCAGTTACCACAAGAAGCAATGATGGGAGTGTCTGCTGGTCTAT1370.14154354788717843No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC1320.13637772497158798No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG1300.13431139580535179No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT1270.13121190205599753No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1270.13121190205599753No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT1260.13017873747287942No Hit
CATAGACCCCATGACTCAGCTCCTCAAAGTGTGGGGAATACAGGTGTGAG1260.13017873747287942No Hit
CATAGATGCCACCACACCCAGTTAATTTTTGTATTTTTAGTAGAGATGGG1210.12501291455728897No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1180.12191342080793471No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGGCCATGCTGAAGT1180.12191342080793471No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1120.11571443330922616No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACACTGACGAATGAGGAAACAGG1120.11571443330922616No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT1110.11468126872610807No Hit
CATAGATCTAGCCCATCACTTCAGCATCTACACATAGATGCCTGGCCAAC1080.11158177497675381No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1060.1095154458105176No Hit
CATAGATCTAGCCCATCACTTCAGCATCTCTCGGTGGGTTGAGGGAGTCT1000.10331645831180908No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCGCAG970.1002169645624548No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)