FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140107
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG97686.971814398995053No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT80235.7263377275939105No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA72765.193173788604423No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA59654.257460369574682No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG59464.243899305530773No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA41912.991285232001256No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT40582.896357783693891No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG39052.787155531129779No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG35482.532350275146852No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA30812.199033595751818No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA26751.9092550693398616No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA24141.722968873789318No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC23571.6822856816575902No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA23251.6594459948467957No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT20421.4574575146138309No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC19421.3860834933300976No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT17461.2461904116139808No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA14641.0449156715938535No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT14221.0149385826546853No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATAGAACAGCTAAAAATCT13880.990671415418216No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA12270.8757592411514057No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGTCCAGTGAACTCAAGGGG10230.7301562377325901No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA10110.7215913551785421No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA9780.6980379281549102No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9520.6794806826211396No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA9390.6702020598542542No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC9340.6666333587900676No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT9060.6466486328306222No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT8850.6316600883610383No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT8680.6195265047428037No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA8280.5909768962293105No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC8230.5874081951651238No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGAACATTAGCTTAGTTAAT7510.536018899840836No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG7190.5131792130300413No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC7170.5117517326043666No Hit
CATAGAACATCTACAGAACTCTCTACCCACCATTGGGGATGGCTGGTTGA6820.4867708251550601No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA6810.4860570849422228No Hit
CATAGATGTGGTCTCAGTGCCCTATGAAGAACATTAGCTTAGTTAATTAG6620.4724960208983134No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTACAGAACATTAGCTTAG6610.4717822806854761No Hit
CATAGATGCTTCTGATATGTTGCCGTAAACTTAGCAACCTGTACATTTCG6420.4582212166415668No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA6260.4468013732361695No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTACATGTGTGAGAGGGAAG6200.44251893195914555No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG6000.42824412770239884No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA5990.4275303874895615No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACGGAGATAGAGAGGTTGGTT5770.4118281028071403No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT5760.41111436259430295No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG5430.38756093557067095No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACACAGTGAAACAAGAT5070.36186628790852704No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGGAGAGGAGGGGGC5020.3582975868443404No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT5010.35758384663150306No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG4690.3347441598207085No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAGAATTTGCAAATACAGAATCAGT4540.3240380566281485No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGTGTGAGAGGG4520.32261057620247385No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT4380.3126182132227512No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG4360.31119073279707654No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC4300.30690829152005256No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT4230.30191211003019125No Hit
CATAGATGCTTCTGATATGTTGCCGTACTCGAGGCAGAGGACAGGTATCT3890.2776449427937219No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTACATGTGTGAGAGGGAAGGAC3880.2769312025808846No Hit
CATAGACTCTGTTTTGCTACCTGGGGGAGAGGAGGGGGCAGAATATCTAT3830.27336250151669794No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC3760.26836632002683664No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3680.262656398324138No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3590.256232736408602No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3550.25337777555725266No Hit
CATAGACCTGTGTGTGAGGCATTGTTTACACATAGACATGTGTGAGAGGG3530.251950295131578No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG3290.23482053002348205No Hit
CATAGAAGGAGCTGGACTGGATGGACTACACATAGAACAGCTAAAAATCT3170.22625564746943408No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGCAGCAACAAAAGTCA3160.22554190725659673No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT3140.2241144268309221No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA3140.2241144268309221No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG3010.21483580406403677No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2970.21198084321268745No Hit
CATAGAAGGAGCTGGACTGGATGGACTCTAGCTAGACACTGACGACATGT2910.20769840193566344No Hit
CATAGAACAGTAAGTCAGCTCCTCCTAGAACATTAGCTTAGTTAATTAGG2900.20698466172282612No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGTGGAGG2890.20627092150998877No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2840.20270222044580216No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2820.20127474002012746No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACATAGAACAGCTAAAAATCTTGG2770.19770603895594083No Hit
CATAGAATACAACACACTCTCTGCCCTGCACAGGGTAATGGAGGAGTATG2700.1927098574660795No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC2580.18414497491203152No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT2580.18414497491203152No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGTGTGAGA2570.1834312346991942No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCCTTGGAGAGAAATGCTGCT2570.1834312346991942No Hit
CATAGATGCTTCTGATATGTTGCCGTTCTGATATGTTGCCTTTCCTCAGT2520.17986253363500754No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA2430.17343887171947153No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGAACATTAGCTTAGTTAA2420.1727251315066342No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA2360.16844269022961023No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT2300.16416024895258624No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA2230.1591640674627249No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT2200.1570228468242129No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG2100.14988544469583961No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC2050.14631674363165295No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC2020.14417552299314096No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGTCATTCTTCTCTGGG2010.1434617827803036No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGTGTGAGAG1980.14132056214179164No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC1920.13703812086476763No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA1900.135610640439093No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA1870.133469419800581No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCACTGCCTCTTGTAGAAGG1860.13275567958774365No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT1760.12561827745937035No Hit
CATAGATCATGGGACTTCAGCATGGCCTCATAGATCTCCCTCATTATCCC1740.12419079703369568No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTTGGTGGAGGGCTT1730.12347705682085836No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTAG1730.12347705682085836No Hit
CATAGAACATCTACAGAACTCTCTACCCACATGTGTGAGAGGGAAGGACT1710.12204957639518367No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCGTAGGCTGAGAAAGGAGGATCA1700.12133583618234635No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACTGCAGCAACAA1670.11919461554383436No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1660.11848087533099702No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1630.11633965469248504No Hit
CATAGACTCTGTTTTGCTACCTGGGGAAAAGGGATAGGAGAGGAGGGGGC1520.1084885123512744No Hit
CATAGATGTGCCACATACCTTTCCCATCTAGGGTAATGGAGGAGTATGGG1470.10491981128708773No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1420.10135111022290108No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG1410.10063737001006373No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1410.10063737001006373No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)