FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804357

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804357
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35968
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG518014.401690391459073No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG20165.604982206405694No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT20165.604982206405694No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT19075.301935053380783No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA18205.060053380782918No Hit
CATAGAAGGTGATAATCATGACAGCCAATAGACTGCTCTTTGACTTATGA11433.1778247330960854No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT8742.429937722419929No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACAAGGCTTGTGAGGG7562.1018683274021353No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA6801.8905693950177938No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT6641.846085409252669No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA5631.5652802491103204No Hit
CATAGAAGCAGCATTGATCATCCTCCAGAAGCAGCATTTTAACACAGCAT5161.434608540925267No Hit
CATAGAAGCAGCATTGATCATCCTCCATGAGACAAGCTATATAGAAGTAC5161.434608540925267No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG5001.3901245551601424No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT4591.2761343416370106No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT3791.053714412811388No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTGGGAGGCACTTGGTCCA3791.053714412811388No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG3741.0398131672597863No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA3711.0314724199288257No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC3601.0008896797153026No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGCTGAAGTCCCATGATCTA3430.9536254448398576No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCCGGCCACATTATTTTCTATG3350.9313834519572954No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTGAGGCACT3190.8868994661921709No Hit
CATAGACCATCTGCGCATCCTGTCTGTAGGTTGGGAGTTCGAGACCAGTC3140.8729982206405693No Hit
CATAGACCGGGGGTAGATAGGTGGTTGGGAGTTCGAGACCAGTCTATGTG3140.8729982206405693No Hit
CATAGACTCAAGAAACTTACAATCATGGCATACGGTAGCAGAGGCACTTG3020.839635231316726No Hit
CATAGAGCCTGGCATTTGAGGTAAGGTTGGGAGTTCGAGACCAGTCTATG3020.839635231316726No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATACGGTAGCAGAGGCACTTG2990.8312944839857651No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACCAAGTGGTTGGGAG2840.7895907473309609No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTAAGGCTTGTGAGGGC2760.7673487544483986No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTTTGACT2320.645017793594306No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTGTAGCATTTTAACACAGCAT2290.6366770462633452No Hit
CATAGAGGGACGGAGGCAAGAGGATGGGTTTTTGCCAGATAGCTCTATGT2160.6005338078291814No Hit
CATAGAAGCAGCATTGATCATCCTCCATGGCCACCCCATCCTACATGTGT2090.5810720640569396No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGGCACTTGGTCCAGACT1930.536588078291815No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTAGTCTTTT1900.5282473309608541No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGGTTGGGAGTTCGAGACCAGTC1880.5226868327402134No Hit
CATAGAAGCAGCATTGATCATCCTCCATACGGTAGCATTTTAACACAGCA1670.46430160142348753No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1490.41425711743772237No Hit
CATAGACATGAGTGGCCGAACAGACGTCTCATAGACATGCCTAGCCATTT1440.400355871886121No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTGCTTCCCT1440.400355871886121No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1310.3642126334519573No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTAAGGCTTG1270.35309163701067614No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT1230.341970640569395No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1170.3252891459074733No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTTGCTCTTT1140.31694839857651247No Hit
CATAGACCATCTGCGCATCCTGTCTGCTACCGTATAAAGTGGGGAAAGGA1040.2891459074733096No Hit
CATAGAGTTTTGTTCCCTTGCTGGCTTCCCTGCTTGTCTTTCATCTATGT1000.2780249110320285No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC890.24744217081850534No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTTAGGGATAGTTTGAGGG840.2335409252669039No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGTGTAGTCTTTTGCAAGTTTGTC820.22798042704626334No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCCCGGCCACATTATTTTCTATGTG810.22520017793594307No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACCAAGTCGACACTCT780.2168594306049822No Hit
CATAGACCATCCTCCCACCTTGACCTCACATAGAGGTGTCCTTTCCCCAT690.19183718861209964No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTGGAGGCACTTGGTCCAG640.1779359430604982No Hit
CATAGAGTTTTGTTCCCTTGCTGGCACCCAGTACAGGAGCACCCTCTATG610.16959519572953735No Hit
CATAGACTACCACTACCCAGCACAGCATTGAAGTTCTATGTGTAGAACCA590.1640346975088968No Hit
CATAGAAGGTGATAATCATGACAGCCATGCTGAAGTCCCATGATCTATGT560.15569395017793594No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG560.15569395017793594No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT550.15291370106761568No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGTGTTAAAGTGGGGAAAGGACAC540.15013345195729536No Hit
CATAGAGCCTGGCATTTGAGGTAAAGTGGGGAAAGGACACCTCTATGTGT540.15013345195729536No Hit
CATAGACCATCCTCCCACCTTGACCTCATAGAGGGACGGAGGCACTTGGT540.15013345195729536No Hit
CATAGAGGTGAGCGGCTGTCTCCATGAGACCAAGGCCATGCTGAAGTCCC520.1445729537366548No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCACCCCATCCTACATGTG510.14179270462633453No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCAGTACAGGAGCACCCTCTATGTG510.14179270462633453No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG490.13623220640569395No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTTTAACACA490.13623220640569395No Hit
CATAGAAGGTGATAATCATGACAGCCACATGCCTAGCCATTTTTGGTTCT420.11677046263345195No Hit
CATAGAAGGTGATAATCATGACAGCCAACATAGAGGTGTCCTTTCCCCAT420.11677046263345195No Hit
CATAGATTGCACATAAAGTCTGATCACATCTCAAGTCTCACTCTTCTATG380.10564946619217083No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)