FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences157013
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA149799.53997439702445No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT143759.155292873838473No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA105986.749759574048008No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG85045.416112041678078No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA71374.54548349499723No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA70724.504085648959003No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG63584.049346232477566No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT48163.0672619464630317No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG42882.7309840586448257No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA28891.8399750339143892No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA24831.5813977186602384No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT23051.4680313095094037No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA22581.4380974823740709No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG17031.0846235662015247No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC16431.0464101698585466No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA15951.0158394527841643No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC14000.891645914669486No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT12220.7782795055186513No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT11670.7432505588709215No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTAGCCTGTTCACTCTGAT11080.7056740524669932No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA10980.6993051530764969No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA9600.6114143414876475No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9300.5923076433161585No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG8830.5623738161808258No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG8700.5540942469731805No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG7800.49677415245871365No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA7610.48467324361677055No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT7220.45983453599383495No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA6920.4407278378223459No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG6760.43053759879755177No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA6710.4273531491023036No Hit
CATAGACCTGTGTGTGAGGCATTGTTGACATGTGTGAGAGGGAAGGACTC6660.4241686994070555No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACATAGAACAGCTAAAAATCTTGG6340.4037882213574672No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT6240.3974193219669709No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACGGAGATAGAGAGGTTGGTTCT6170.3929610923936235No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCATAGAACAGCTAAAAATC6010.3827708533688293No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA5380.34264678720870245No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT4930.313986739951469No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4750.30252272104857564No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCGGTCATTCTTCTCTGGGGGCTC4610.2936062619018807No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT4550.2897849222675829No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTAGGGTAATGGAGGAGTA4540.2891480323285333No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC4510.28723736251138443No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTATAGATGCTCAGATCTCAAAA4510.28723736251138443No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA4420.2815053530599377No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT4390.2795946832427888No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA4330.275773343608491No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTTTCCTCAGTTCTTTTTCTAT4230.2694044442179947No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG4220.26876755427894505No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA4140.263672434766548No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC4020.2560297554979524No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCTAACTTCATAGCACATCATG4000.25475597561985314No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCATACTCCCTCATTATCCCTG3990.2541190856808035No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG3670.23373860763121526No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG3560.22673281830166928No Hit
CATAGAGCTTTAAGACCTGTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT3560.22673281830166928No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT3520.22418525854547075No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT3490.22227458872832187No Hit
CATAGAGAACAGCCCTGAGAGAATGAGAACAGCTAAAAATCTTGGAGCTC3440.21909013903307367No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA3180.20253100061778323No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3090.19679899116633653No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTACTCTCAGTTGTGTGTGTGGT3070.1955252112882373No Hit
CATAGATGCTTCTGATATGTTGCCGTGATGCTCAGATCTCAAAAGGCTTC3010.19170387165393948No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT2980.1897932018367906No Hit
CATAGATGCTTCTGATATGTTGCCGTACGGAGATAGAGAGGTTGGTTCTA2960.1885194219586913No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC2920.1859718622024928No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2900.18469808232439353No Hit
CATAGACCCCATGTGCAGTGTAAGCTGTCCAGTGAACTCAAGGGGGTCTA2850.18151363262914536No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC2830.1802398527510461No Hit
CATAGAGGATCCCCTGACATTTTGGTTGGTGGAGGGCTTTGCTGTTTCTA2760.17578162317769866No Hit
CATAGATGCTTCTGATATGTTGCCGTACAGGTGCAAATTGTCAGTGTGTC2740.1745078432995994No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2700.17196028354340087No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2670.17004961372625196No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA2660.16941272378720235No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA2570.16368071433575565No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC2570.16368071433575565No Hit
CATAGACTCTGTTTTGCTACCTGGGGGACACTGACGACATGTGTGAGAGG2500.1592224847624082No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG2500.1592224847624082No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGAGACCAAAGCTAGAA2290.14584779604236592No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT2260.143937126225217No Hit
CATAGAACAGTAAGTCAGCTCCTCCTAGAACAGCTAAAAATCTTGGAGCT2190.13947889665186958No Hit
CATAGACCACCGTGCCCAGATAAGTTACATAGACCAAAGCTAGAAACTCC2150.13693133689567105No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2020.12865176768802583No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGATTTACTGACATGGGCAAT1990.12674109787087692No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGACATGTGTGAGAGGGAAGGAC1950.12419353811467841No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGACGACATGTGTGAGAGGGAA1860.1184615286632317No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1830.11655085884608281No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGCTGAGAAAGGAGGATCACTCTA1830.11655085884608281No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGGACACTTTGGACTCTGCCTCT1770.11272951921178502No Hit
CATAGACCTGTGTGTGAGGCATTGTTTACGGTAGCACAACTGGCATCTGG1750.11145573933368574No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT1740.11081884939463613No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACACATAGAACAGCTA1740.11081884939463613No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1740.11081884939463613No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGGACACTTTGGACT1710.10890817957748722No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACATGTGTGAGAGGGAAGGAC1680.10699750976033832No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGATGCTCAGATCTCAAAAGG1640.10444995000413977No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGAACAGCTAAAAATCTTGG1620.10317617012604052No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)