FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804361

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804361
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences157013
Sequences flagged as poor quality0
Sequence length150
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA148789.475648513180438No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT141679.022819766516148No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT106606.789246750269086No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA83765.334590129479724No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA71664.563953303229669No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT70234.472878041945572No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG63624.051893792233765No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT46742.976823575117984No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG42612.7137880302904853No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA28871.8387012540362901No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA24701.573118149452593No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT23181.476310878717049No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA22531.4349130326788229No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG17001.0827128963843757No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA16481.0495946195537948No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA15931.0145656729060653No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC13860.8827294555227911No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT12220.7782795055186513No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT11850.7547145777738149No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT10970.6986682631374472No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTAGAAGTGTATTAATTATCTAT10760.6852935744174049No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT9460.6024978823409527No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9190.5853018539866126No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG8650.5509097972779324No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC8640.5502729073388828No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC7860.5005954920930115No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA7610.48467324361677055No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT7280.4636558756281327No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA6900.4394540579442467No Hit
CATAGAGTCCTTCCCTCTCACACATGTCAACAATGCCTCACACACAGGTC6640.42289491952895625No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA6580.41907357989465843No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6530.4158891301994102No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGGAGGAGCTGACTTAC6380.4063357811136657No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC6250.39805621190602053No Hit
CATAGAACCAACCTCTCTATCTCCGTAGCATTCTCTCAGGGCTGTTCTCT6240.3974193219669709No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGAGGAGAATGATATTGTT5870.37385439422213446No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT5490.34965257653824844No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT4780.3044333908657245No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4770.3037965009266749No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGGTAGCAAAACAGAGTC4610.2936062619018807No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACTACGGCAACATATCAGA4610.2936062619018807No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC4550.2897849222675829No Hit
CATAGATCCCATACTCCTCCATTACCCTACTTTTCTAATCAATAGTACCC4480.2853266926942355No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT4480.2853266926942355No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT4430.2821422429989874No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4370.27832090336468956No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA4360.2776840134256399No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT4290.27322578385229246No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG4250.27067822409609393No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA4090.26048798507129983No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC4010.2553928655589027No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAAACATTGGAAAGATGGGGA3990.2541190856808035No Hit
CATAGAGGCACAGGGATAATGAGGGAGTATGAGGAATCTTTGGGAGGCTA3950.25157152592460497No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG3630.2311910478750167No Hit
CATAGACCACACACACAACTGAGAGTCACTGACAGGTCTTAAAGCTCTAT3550.22609592836261966No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3550.22609592836261966No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCATTCTCTCAGGGCTGTTCTC3480.22163769878927225No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT3470.22100080885022258No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT3420.21781635915497444No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA3190.20316789055683285No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3150.20062033080063432No Hit
CATAGAACCAACCTCTCTATCTCCGTACGGCAACATATCAGAAGCATCTA3060.19488832134918765No Hit
CATAGACCACACACACAACTGAGAGTACACGGAAGACACAGCACACTCTT3050.194251431410138No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCACGGCAACATATCAGAAGCATC3040.1936145414710884No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT2990.19043009177584022No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG2910.18533497226344314No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2880.18342430244629424No Hit
CATAGACCCCCTTGAGTTCACTGGACAGCTTACACTGCACATGGGGTCTA2820.17960296281199647No Hit
CATAGAAACAGCAAAGCCCTCCACCAACCAAAATGTCAGGGGATCCTCTA2810.17896607287294683No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT2750.17514473323864901No Hit
CATAGACACACTGACAATTTGCACCTGTACGGCAACATATCAGAAGCATC2740.1745078432995994No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2700.17196028354340087No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA2680.1706865036653016No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG2640.16813894390910306No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC2540.16177004451860674No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2490.15858559482335857No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCCAGGTAGCAA2460.15667492500620966No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG2450.15603803506716005No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCAGTGTAGGAAACATTGGAAAG2320.14775846585951483No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT2270.14457401616426666No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGGAGGAGCTGACTTACTGTT2140.13629444695662143No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTAACTTATCTGGGCACGGT2060.13119932744422436No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGATAGCGAGAAGAGTGGA2010.1280148777489762No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT1960.12483042805372803No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTACCCCAGGTAGCAAAACAGAG1920.1222828682975295No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA1850.11782463872418208No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGGAATCTTTGGGAGGCTA1830.11655085884608281No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1820.11591396890703318No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGGCAACATATCAGAAGCATCT1780.11336640915083464No Hit
CATAGATCACCAGATGCCAGTTGTGCTACCGTAAACAATGCCTCACACAC1770.11272951921178502No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1760.11209262927273538No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTATAGAAGTGTATTAATTATCTATG1740.11081884939463613No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTCATAGGGCACTGAGACCACAT1740.11081884939463613No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAAGAAGTGTATTAAT1720.10954506951653684No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGCCCCAGGTAGCAAAACAG1650.10508683994318942No Hit
CATAGAGTCCTTCCCTCTCACACATGTACGATAGCGAGAAGAGTGGAGGC1640.10444995000413977No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTACGATAGCGAGAAGAGTGGA1600.10190239024794126No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC1580.100628610369842No Hit
CATAGATATTCTGCCCCCTCCTCTCCCTGACGGCAACATATCAGAAGCAT1580.100628610369842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)