FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108716
Sequences flagged as poor quality0
Sequence length150
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3078228.314139593068177No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT56635.208984878030833No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT34083.1347731704624895No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG29922.752124802237021No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA24492.252658302365797No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA23792.1882703557893963No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA19201.7660693918098533No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA15271.404577063173774No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT14891.3696236064608707No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA14741.3558261893373562No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT13901.278560653445675No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG13371.229809779609257No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9980.91798815261783No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA9900.9106295301519556No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9570.8802752124802237No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG8010.7367820743956731No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT7930.7294234519297987No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7500.6898708561757239No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT7120.6549173994628206No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT6030.554656168365282No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT5900.5426984068582361No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT5860.5390190956252989No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT5690.5233820228853159No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA5660.520622539460613No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA5660.520622539460613No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA5600.5151035726112072No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGGAGCTGACTTACTGTTC5550.5105044335700357No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG5290.48658891055594394No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC5030.46267338754185217No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG5000.4599139041171493No Hit
CATAGACCATCCCTTCTACAAGAGGCAACGATAGCGAGAAGAGTGGAGGC4980.4580742485006807No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG4460.4102432024724972No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGGATAATGGCCTCTA4370.40196475219838845No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4240.3900069906913426No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC4160.3826483682254682No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC4040.3716104345266566No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCACGGCAACA3940.3624121564443136No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3880.35689318959490784No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3780.3476949115125649No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA3590.3302181831561132No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGCAACTGGACCAACCAATGAC3480.3201000772655359No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT3290.3026233489090842No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT3230.29710438205967843No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATAGTACGGCAACATATCAGA3190.29342507082674124No Hit
CATAGACCATCCCTTCTACAAGAGGCAACAATGCCTCACACACAGGTCTA3160.29066558740203835No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA3100.28514662055263257No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3100.28514662055263257No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3050.280547481511461No Hit
CATAGACACACTGACAATTTGCACCTGTACATTTCGTCTATGAGGAGAAT3050.280547481511461No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGGAGAATGATATTGTTGCAGAT3030.27870782589499243No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT2960.27226903123735235No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCCAGGGCAGAGAGTGTGTTGTAT2890.2658302365797123No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2880.264910408771478No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2880.264910408771478No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT2810.25847161411383784No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG2720.25019316383972917No Hit
CATAGAGGCACAGGGATAATGAGGGAGGATAGCGAGAAGAGTGGAGGCTC2720.25019316383972917No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCGAGTATCTGGGACTACAGGT2560.23547591890798045No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGATAGCGAGAAGAGTGG2460.22627764082563742No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG2370.21799919055152875No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGAGAATGGCTTCCA2360.21707936274329445No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG2330.21431987931859156No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA2180.20052246219507708No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2150.1977629787703742No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT2130.1959233231539056No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAATTGCTTCACAAAATCCTCCCTC2090.19224401192096838No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2090.19224401192096838No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGAATAACAGCTTCCA2040.1876448728797969No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCAAAGCACCGGGATTACAGGC2020.1858052172633283No Hit
CATAGACCATCCCTTCTACAAGAGGCAACTTGGTCTCATAGACCTTTTTC2000.1839655616468597No Hit
CATAGAGCCCCCAGAGAAGAATGACGCAGAGACTTGGTCTCATAGAGCCC1860.17108797233157952No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA1860.17108797233157952No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGTTTCACTGAGCTGAG1850.17016814452334522No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA1830.16832848890687663No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGAGGTTTTCTGTTTACTC1820.16740866109864233No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA1790.16464917767393944No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1700.15637072739983074No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1680.15453107178336215No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGTGAACTCTAAAGACCTTTTT1670.15361124397512788No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1650.15177158835865925No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGC1580.14533279370101918No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1570.14441296589278485No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTGTTTACTCGGAGATTTG1560.14349313808455058No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCTTCCA1550.14257331027631628No Hit
CATAGACACACTGACAATTTGCACCTGCCTCTATGTGTAGAACCATGTCG1540.141653482468082No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1450.1333750321939733No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1450.1333750321939733No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1440.132455204385739No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCAAAATGTTGGGATTACAAGT1410.1296957209610361No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1410.1296957209610361No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1390.1278560653445675No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1370.1260164097280989No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1340.123256926303396No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1330.12233709849516171No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1330.12233709849516171No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCAGTCCAGTCCATCCAGTCCA1310.1204974428786931No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGCCCCCAGAGGAGAATGATATT1280.11773795945399022No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1270.11681813164575591No Hit
CATAGAGCAGCATTCTCTCAGGGCTGTTCTCTATGTGTAGAACCATGTCG1260.11589830383752162No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1250.11497847602928732No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTATGTTAGAACCATGTCGTCA1250.11497847602928732No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA1220.11221899260458441No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1220.11221899260458441No Hit
CATAGACCACACACACAACTGAGAGTTTTTTTTGTGAGATAAAAACTGTT1210.11129916479635013No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCTTCA1210.11129916479635013No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGTGCCCGGCTTCCTTGGGACA1210.11129916479635013No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGGAAAAGGGATAGGAGG1200.11037933698811583No Hit
CATAGACACACTGACAATTTGCACCTGTAGTCCCAGCTACTAGGGAGGCA1160.10670002575517863No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1150.10578019794694433No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAGGGGAAGCTCAATTCTGAGGTT1130.10394054233047573No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)