FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33993
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1747151.39587562145147No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA9342.7476245109287207No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG7392.1739769952637307No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA6301.8533227429176597No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG5041.4826581943341277No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG4811.414997205306975No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC4691.3796958197275908No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC3731.097284735092519No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA3541.0413908745918279No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG2820.8295825611155238No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC2410.7089694937192952No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGACGACATGGTTCTACACA2170.6383667225605272No Hit
CATAGAACTTTGTGCCCCCAGTGTCTATGATCGTATCTATGAAAACCACT2050.6030653369811432No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG2030.5971817727179125No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCACACTGACGACATGGTTCTACACA1940.5707057335333745No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA1340.39419880563645454No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1170.3441885093989939No Hit
CATAGAGGGGCATGCTGGATAAATCTTAGGTAGAGGAGTTTCAAACATCT1100.3235960344776866No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT1050.3088871238196099No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC1050.3088871238196099No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1030.30300355955637925No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT990.2912364310299179No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC980.2882946488983026No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG970.28535286676668725No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG850.2500514811873033No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT820.24122613479245725No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG820.24122613479245725No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT790.23240078839761127No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG770.22651722413438063No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA760.22357544200276527No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA760.22357544200276527No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT750.22063365987114994No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT740.21769187773953458No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA740.21769187773953458No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC730.2147500956079193No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA720.21180831347630394No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG690.20298296708145797No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG680.2000411849498426No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG670.19709940281822727No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG650.19121583855499663No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG640.18827405642338127No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT640.18827405642338127No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACCACTTGAACATTGCCTT610.1794487100285353No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA600.17650692789691996No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT600.17650692789691996No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA590.17356514576530463No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCACACTGACGCCATGGGTCCT570.16768158150207396No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCTACACATAGATCTTAGGTAG550.1617980172388433No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC540.15885623510722796No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCCTGCTACCGTAGGCTAGTCC500.14708910658076663No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGTCTAGGAAAGCAATCACCGCCAG500.14708910658076663No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG500.14708910658076663No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCAGTTTTTCCAAATATAAGAT480.14120554231753596No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT470.13826376018592063No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGACGACATGGTTCTACACT460.1353219780543053No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC430.1264966316594593No Hit
CATAGACTCAAGCAATCCTCCCACCTTGACCTCTCAAAGTGCTAGGATTA420.12355484952784397No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA420.12355484952784397No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGACGGAGTGAGGGCAGT420.12355484952784397No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA410.12061306739622862No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTTCTTATAGCCAGTGTCTCCCCT400.1176712852646133No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG400.1176712852646133No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG390.11472950313299796No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG380.11178772100138264No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA380.11178772100138264No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTA370.10884593886976729No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCCCAAAAATCTTTTTC370.10884593886976729No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGCGATGGTTTATGCCTGTAAT370.10884593886976729No Hit
CATAGAAGGAGGGGAAACTGAGGCCAACGACATGGTTCTACACATAGAAG350.10296237460653664No Hit
CATAGGTCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG340.1000205924749213No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG340.1000205924749213No Hit
CATAGAACTTTGTGCCCCCAGTGTCTATGACTGAGCAGAGTTGGGTGTGT340.1000205924749213No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)