FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804373

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804373
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36167
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1457040.28534299223049No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG10592.9280836121326073No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT9822.715182348549783No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG7191.988000110598059No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG4211.1640445710177785No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC4201.161279619542677No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3881.0728011723394255No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA3500.9677330162855642No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG3260.9013741808831254No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGTGTGATCATATC3070.8488401028561949No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC2830.7824812674537561No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTAGAAGCTTTGA2520.6967677717256062No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTACCGTAAGAACCATGTCGTCAG2450.6774131113998949No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG2310.6387037907484724No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT2240.6193491304227611No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT2040.5640501009207288No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT1800.4976912655182902No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG1720.4755716537174773No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA1630.4506870904415627No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT1620.44792213896646116No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTACGGTGCCATACCAAGAA1600.4423922360162579No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT1430.3953880609395305No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC1420.39262310946442885No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA1360.37603340061381924No Hit
CATAGACACAACGTTTGAGACTGCCTACACTGGGACATGGATAGAGGCAA1280.35391378881300634No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1280.35391378881300634No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGAAACATTTTCTGGTCAGC1240.3428539829125999No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACACTGAAACATTTTCTGG1230.3400890314374983No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA1210.3345591284872951No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG1110.30690961373627895No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1110.30690961373627895No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG1100.3041446622611773No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGACATGGTTCCCCAATATG1050.2903199048856693No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACACTACGTGGTGTTTGGG1040.28755495341056764No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT1010.2792600989852628No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT970.2682002930848564No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT920.2543755357093483No Hit
CATAGAGCCATCATCATTTCTCACCCAGTATTTCATTACAGGAAAGTTGG900.2488456327591451No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG880.24331572980894187No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC860.23778582685873864No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA850.235020875383637No Hit
CATAGAGATCTTCTCGGCTTAGCGGCACACTGAAACATTTTCTGGTCAGC830.2294909724334338No Hit
CATAGACGGGAAGAGTAAGACCACCCGTCAGTGTCAGGGTAATTCTGGCC810.22396106948323058No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA790.21843116653302735No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGAAACATTTTCTGGTCA770.21290126358282413No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGCCATTGTCGCCTT770.21290126358282413No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTAGTATGCAGTCTGTGAGCTG750.20737136063262088No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA750.20737136063262088No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGGTAATTCTGGCCTTGT730.20184145768241765No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA730.20184145768241765No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA710.19631155473221443No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA700.19354660325711284No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTAGAAGCTTTGAGATTTGTGT700.19354660325711284No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA690.19078165178201123No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCCGATGCTTATTACATTGTTCT690.19078165178201123No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGTATGCAGTCTGTGA680.18801670030690962No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT660.1824867973567064No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGAAAGTTGGAACCTATCAGTGTCTA660.1824867973567064No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA650.17972184588160478No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTACCAAAAGCACAAGGGAGAA620.17142699145629994No Hit
CATAGAGCCATCATCATTTCTCACCCAGTATGGTAGCAGGAAAGTTGGAA620.17142699145629994No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG610.16866203998119833No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC610.16866203998119833No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATGTGACACCGAAAAACACCCT610.16866203998119833No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTATGAGGGAGGCTGAAACT590.1631321370309951No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGTGTAACCTGTGTATATTCTCCTG580.1603671855558935No Hit
CATAGATAGCAGCAATCTCAGGCCTCACACTGAGGTTTCCTGGGCATCAA570.15760223408079188No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC560.15483728260569027No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTACATTTATCGGGAG550.15207233113058866No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT550.15207233113058866No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTAGCAGAGGCAAGGGTAC540.14930737965548704No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA530.14654242818038543No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGTGTAGAACCATGTCGTC510.1410125252301822No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTACCAAAAGCACAAGGGAGA490.13548262227997898No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA490.13548262227997898No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGGGTAATTCTGGCCTTGTTCTAT480.13271767080487737No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA470.12995271932977576No Hit
CATAGAGGGCTATCCTTGCTCAGATCAAGTCAGGTAAACAAACTTCTGGC450.12442281637957255No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG440.12165786490447093No Hit
CATAGATCCCTGGCAAGAATTCCTCAGACTTGGTCTCATAGATCCCTGGC440.12165786490447093No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA430.11889291342936932No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA430.11889291342936932No Hit
CATAGAGGGCTATCCTTGCTCAGATCATGGTGGGAGTATACTGATAGCTC420.1161279619542677No Hit
CATAGATCTCAAACAGCCTCTCCCAGTGTACCAAAAGCACAAGGGAGAAT420.1161279619542677No Hit
CATAGAACAATCAGGCACCCACCATGTGTCAGTGTGTGCCATACCAAGAA410.11336301047916608No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA410.11336301047916608No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG410.11336301047916608No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA400.11059805900406447No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA390.10783310752896286No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA380.10506815605386126No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA380.10506815605386126No Hit
CATAGATTTCTGTACCTCACTGCCGAGGTTTCCTGGGCATCAAGTCTATG370.10230320457875965No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG370.10230320457875965No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTGAAACATTTTCT370.10230320457875965No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCAGAGGTTTCCTGGGCATC370.10230320457875965No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)