FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804375
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70051
Sequences flagged as poor quality0
Sequence length150
%GC49

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3290446.971492198541064No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG33354.760817118956189No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA29304.182666914105438No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG16892.4111004839331347No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT9361.336169362321737No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT8171.1662931292915162No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAACCAAGAAATAAAGC6780.9678662688612583No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGGCACTTGGTCCAGA5910.8436710396710968No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG5190.7408887810309631No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA4930.7037729654109149No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG4910.7009179026709113No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTATCTGGGACTATAGGTG4870.6952077771909038No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCAGCATTTTAACACAGCATTGA4740.6766498693808796No Hit
CATAGAAGCAGCATTGATCATCCTCCACGGTAGCATTTTAACACAGCATT4250.6067008322507887No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC4180.5967081126607757No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT4090.583860330330759No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC3900.5567372343007237No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA3790.5410343892307033No Hit
CATAGACCATCCTCCCACCTTGACCTGTAGGATGGGTTTTTGCCAGATAG3480.49678091676064584No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTACACTGACACTCTTGGT3380.48250560306062723No Hit
CATAGAAGCAGCATTGATCATCCTCCAAGCAGCATTTTAACACAGCATTG3240.4625201638806013No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA2980.425404348260553No Hit
CATAGACCATCCTCCCACCTTGACCTGGTCTCATAGGGATAGTTTGAGGG2960.4225492855205493No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT2370.3383249346904398No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG2040.2912163994803786No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1980.28265121126036746No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGTCTTCAGGTCA1920.27408602304035634No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1850.2640933034503433No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1750.24981798975032476No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC1710.24410786427031733No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1660.23697020742030808No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGCCATGCTGAAGTCCCA1540.2198398309802858No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG1520.21698476824028207No Hit
CATAGACTACCACTACCCAGCACAGCCAGCACCTGAACTCTGGGTTAACC1490.2127021741302765No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1470.20984711139027282No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGACCACAGGTG1420.2027094545402635No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1420.2027094545402635No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1400.19985439180025982No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG1390.19842686043025798No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1350.19271673495025052No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1340.19128920358024867No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1340.19128920358024867No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1320.18843414084024496No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG1250.178441421250232No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1250.178441421250232No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG1240.17701388988023012No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1220.1741588271402264No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1140.16273857618021156No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1130.1613110448102097No Hit
CATAGACTACCACTACCCAGCACAGCCACCCCATCCTACATGTGTCTATG1110.15845598207020598No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG1100.15702845070020413No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1090.1556009193302023No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1070.15274585659019857No Hit
CATAGACTACCACTACCCAGCACAGCCCCCACTGCAGATTCTGTTTTGCT1060.15131832522019673No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1060.15131832522019673No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA1030.14703573111019114No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG1020.1456081997401893No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGAAGAAGAAGTAAG960.13704301152017817No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGGACTACAGGCA950.1356154801501763No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG940.13418794878017443No Hit
CATAGACCATCCTCCCACCTTGACCTACAGGATAGTTGAAACTATAGGCG930.13276041741017258No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA920.13133288604017074No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCTGAGCGAGTGGTCAGCCTCTGG910.1299053546701689No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC900.12847782330016702No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG900.12847782330016702No Hit
CATAGAGAATACAATGAACTGTGATGGCACTTGGTCCATAGAGAATACAA870.12419522919016146No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT850.12134016645015774No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA840.11991263508015589No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG800.11420250960014847No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTACAGGTCA740.10563732138013733No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT740.10563732138013733No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)