FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804378

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804378
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137017
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC112748.228176065743668No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC92456.747337921571776No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA86116.284621616295788No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA75755.5285110606713035No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA46273.376953224782326No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT44613.255800375135932No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA42493.101075049081501No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA41413.022252713166979No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT34252.499689819511447No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA32572.377077296977747No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA29132.126013560361123No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT28612.0880620652911683No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG21801.5910434471634907No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC19441.418802046461388No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG18771.3699030047366385No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT15561.1356255063240328No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC15041.097674011254078No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA14891.0867264645992833No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG12650.9232431012210165No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG11390.8312837093207412No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG11130.8123079617857638No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC11050.80646927023654No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA10980.8013604151309691No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC10900.7955217235817453No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT10780.7867636862579096No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT10270.7495420276316078No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA9900.7225380792164476No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC9830.7174292241108767No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT9570.6984534765758993No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT9070.6619616543932505No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA9060.6612318179495975No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA9060.6612318179495975No Hit
CATAGATCATGAATGACTCCCACTCTGATCTAGCTTCGGAATGTTTTCAT8990.6561229628440267No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA8900.6495544348511499No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6920.5050468190078604No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT6640.48461139858557695No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG6470.47220417904347634No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT6100.4452002306283162No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG6050.44155104841005133No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA5980.4364421933044805No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT5910.4313333381989097No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT5790.42257530087507394No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA5730.41819628221315597No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT5700.41600677288219706No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5620.4101680813329732No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGAACAAGGGCATGGTCAAG5360.39119233379799584No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA5300.386813315136078No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA5220.3809746235868542No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT4930.35980936672091784No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA4710.34375296496055235No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA4510.3291562360874928No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4300.3138296707707803No Hit
CATAGACAGAACACCACACCCCTGTCCATCAGAGCATCACCCCTTCTATG4010.29266441390484393No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC3940.2875555587992731No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGCCCTGTGATTGTCCTGGTCTAT3930.28682572235562015No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCCCTTTACCTACCTTCTC3610.26347095615872484No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCATCGGCCGCACTGAAATTGTCTA3590.26201128327141887No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT3490.2547129188348891No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA3270.2386565170745236No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA3260.2379266806308706No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3090.22551946108877002No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC3040.22187027887050512No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACTTTGTTCCCTGGCTTCTCTAT2970.2167614237649343No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGGGCAAGTGTATGGTCAGTT2960.2160315873212813No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT2910.21238240510301643No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC2700.1970558397863039No Hit
CATAGACCCCCATGCAACCACATCTATTGGGAGGAACAGGGAGATGTTCT2630.19194698468073304No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2550.18610829313150923No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT2450.17880992869497944No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA2410.17589058292036755No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2400.17516074647671456No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2350.17151156425844968No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCGAGAAGGAAAATGTCAGTGGGC2120.1547253260544312No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACTTTGTTCCCTGGCTTCTCT2090.15253581672347227No Hit
CATAGAATTCCCCAATGTCCTGTGCATCGGCCGCACTGAAATTGTCTATG2030.1481567980615544No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC1990.14523745228694251No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCTGGGCCCATAATACACTTT1980.14450761584328953No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1910.13939876073771867No Hit
CATAGACAGTCCTGCCGTGTACATGTACACTGAGGTTCTTCAACACAGCT1900.1386689242940657No Hit
CATAGATGTCCCCATTCATCCTGCAACCACAGCCCAGTTTTCCTTCTCTA1890.13793908785041273No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC1810.13210039630118892No Hit
CATAGAATTGCCTACTTTGGGACCCAACATCGGCCGCACTGAAATTGTCT1780.12991088697022998No Hit
CATAGACCATGTAATACCATCGTGAGCAGATTGCAAACAGAATGGGACCC1760.128451214082924No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG1730.1262617047519651No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC1720.12553186830831212No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCAAGTATATGACACATTACA1670.12188268609004721No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG1630.1189633403154353No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA1630.1189633403154353No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACACCCGTAATCCCTCCCTTTTC1580.11531415809717042No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT1550.11312464876621149No Hit
CATAGAGGGAAGAGAAGAGGAGCTGGGAGGAACAGGGAGATGTTCTATGA1470.10728595721698768No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT1460.1065561207733347No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)