FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804379

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804379
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137017
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG116198.479969638803944No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG91006.641511637242094No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT85906.269295050979077No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT76895.611712415247743No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT45403.313457454184517No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT43583.1806272214396754No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT42893.13026850682762No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT40622.964595634118394No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT38882.837604092922776No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT32392.363940240991994No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT28892.1084974857134515No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT28062.0479210608902543No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG21961.6027208302619382No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG19931.4545640322003839No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG18571.355306275863579No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG15931.1626294547391929No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT15161.1064320485779136No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT14821.0816176094937124No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG12780.9327309749885051No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG11620.8480699475247597No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC11210.8181466533349877No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG11080.8086587795674989No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT10920.7969813964690512No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC10730.7831145040396448No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT10700.7809249947086858No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT10080.7356751352022012No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT9920.7239977521037536No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT9470.6911551121393695No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT9160.6685301823861273No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC9140.6670705094988213No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9120.6656108366115154No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGAGTGGGAGTCATTCATGAT9000.6568527992876797No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT8820.643715743301926No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA7030.5130750198880432No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA6710.4897202536911478No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG6460.47147434259982335No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6410.46782516038155847No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC6090.4444703941846632No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT6020.43936153907909237No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC5870.42841399242429773No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT5840.4262244830933388No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT5820.42476481020603285No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC5670.41381726355123816No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT5610.4094382448893203No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA5260.3838939693614661No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG5260.3838939693614661No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG5150.37586576848128334No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT5120.37367625915032443No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT4760.34740214717881723No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4420.32258770809461595No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4210.30726114277790345No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG4000.29193457746119095No Hit
CATAGACCAGGACAATCACAGGGCACCAAGGTCAAGGGCAGGGATTCTAT3990.29120474101753796No Hit
CATAGAAGGGGTGATGCTCTGATGGACAGGGGTGTGGTGTTCTGTCTATG3940.2875555587992731No Hit
CATAGACAATTTCAGTGCGGCCGATGACACTTGAAAGCTCCCTGGATCTA3560.25982177394045997No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3480.2539830823912361No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTACGGTTGCAGGATGAATGGGG3410.2488742272856653No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT3240.23646700774356466No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA3100.22624929753242298No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3020.22041060598319917No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC3020.22041060598319917No Hit
CATAGAACTGACCATACACTTGCCCTGTCTAGGATGAGATAATTGCCCTT2990.21822109665224024No Hit
CATAGAGAAGCCAGGGAACAAAGTGGATCTCAGAGTTAGCTTGCCTCTAT2910.21238240510301643No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT2900.21165256865936347No Hit
CATAGAACATCTCCCTGTTCCTCCCAATAGATGTGGTTGCATGGGGGTCT2720.19851551267360984No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA2670.19486633045534496No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2540.18537845668785627No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT2480.1809994380259384No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC2410.17589058292036755No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2380.17370107358940862No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2310.16859221848383776No Hit
CATAGATGGCCCACTGACATTTTCCTTCTCGCATTCTTTCTCCAGACCTT2120.1547253260544312No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTAGAATCTTGAACTCAGGAGTCT2060.15034630739251334No Hit
CATAGACAATTTCAGTGCGGCCGATGCACAGGACATTGGGGAATTCTATG2040.1488866345052074No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC1970.14377777939963654No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTACGGTAGGTGGCTTCTGGTGCA1940.1415882700686776No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTGTACATGTACACGGCAGGAC1910.13939876073771867No Hit
CATAGATGGGTCCCATTCTGTTTGCAATCTGCTCACGATGGTATTACATG1850.1350197420758008No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1820.13283023274484188No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1800.13137055985753593No Hit
CATAGACAATTTCAGTGCGGCCGATGTTGGGTCCCAAAGTAGGCAATTCT1780.12991088697022998No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTTGCAGGATGAATGGGGACATCTA1780.12991088697022998No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC1770.129181050526577No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA1710.12480203186465914No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGCAGTTAGGCTACTTGGG1670.12188268609004721No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1660.12115284964639424No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA1640.11969317675908828No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT1590.1160439945408234No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG1580.11531415809717042No Hit
CATAGAACATCTCCCTGTTCCTCCCAGCTCCTCTTCTCTTCCCTCTATGT1510.11020530299159959No Hit
CATAGAAAAGGGAGGGATTACGGGTGTGGATCTCAGAGTTAGCTTGCCTC1470.10728595721698768No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1440.10509644788602875No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGCTCACGATGGTATTACATGG1390.10144726566776385No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)