FastQCFastQC Report
Wed 8 May 2024
EGAF00005804382

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804382
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences126137
Total Bases18.9 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA124639.88052672887416No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG73625.83651109507916No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC60694.8114351855522175No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG58734.6560485820972435No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG49043.8878362415468897No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA41373.2797672372103346No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC36702.909534870815066No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG34102.703409784599285No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC29802.362510603550108No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA28402.2515201725108414No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT27302.164313405265703No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA26942.1357730087127487No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA26342.0882056811244913No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG25021.9835575604303257No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC22551.7877387285253337No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT20161.5982622069654422No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT20151.5974694181723048No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA19601.5538660345497355No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT18581.4730015776496983No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC15511.229615418156449No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG12230.9695806940073095No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT10990.8712748836582447No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT10490.8316354440013637No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT10420.8260859224494002No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA8080.6405733448551971No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA7780.6167896810610686No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA7230.5731862974384995No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG7030.557330521575747No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG6340.5026280948492512No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA6180.4899434741590493No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT6090.4828083750208107No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT5930.4701237543306088No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA5900.46774538795119597No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG5780.4582319224335445No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA5490.4352410474325535No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT5310.4209708491560763No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA5120.40590786208646157No Hit
CATAGATGGCCAAGATACGAGCACATACACTGGCTCAGGTATGTCTTTAT4650.3686467888089934No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTCAAGGGGTAAGGCGTAC4480.35516937932565384No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTCTGTCATTGTCGCTGTCCCA4460.3535838017393786No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGTCATTGTCGCTGTCCC4380.3472414913942777No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT4210.33376408191093815No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC4190.3321785043246629No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGATAGGCTTAGAGGGCT4160.32980013794525No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGCCCTCTCTGCTGTTCCTT4120.3266289827726995No Hit
CATAGAAAAAACAGTTGGCCAGGCATACACTGACGCTATACCACACTACA3980.31552993966877285No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGCGATCATTGTTCACTG3900.3091876293236719No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG3780.2996741638060204No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACACTGACGCTATACCACACTA3700.2933318534609195No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGATCATTGTTCACT3640.28857512070209373No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG3430.27192655604620375No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG3410.2703409784599285No Hit
CATAGATGTGTAGCCTGGGTCTGACACCGTACAAGGGGTAAGGCGTACTG3370.26716982328737804No Hit
CATAGACTCATTGCACTTTCCACAACTGTCACGCTATACCACACTACACA3340.26479145690796513No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG3310.2624130905285523No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGCTATACCACACTA3150.24972846983835037No Hit
CATAGACCCAAGACCCCAGCCTTTACCGTAGACACTGACGACATGGTTCT3020.23942221552756132No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA2970.23545827156187318No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGCTATACCACACTAC2960.23466548276873558No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2930.23228711638932273No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGACATTGCTTCTTGTG2860.2267375948373594No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2790.22118807328539605No Hit
CATAGACCAGCAGACACTCCCATCATACACTGTCATTGTCGCTGTCCCAT2700.21405297414715746No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGATCATTGTTCACTG2550.20216114225009313No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2510.19898998707754267No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTACAAGGGGTAAGGCGTAC2480.1966116206981298No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTATTAACTGGGTGTGGTGG2450.19423325431871694No Hit
CATAGAAAGGTGCAATCAAGCCAGTTTACACATAGAGATCCCACCATTTG2430.1926476767324417No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGATCATTGTTCACTGC2380.1886837327667536No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGACGATCATTGTTCACTGC2360.18709815518047837No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT2340.18551257759420314No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC2330.18471978880106552No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACAAATGAGAAACCTGGA2270.1799630560422398No Hit
CATAGAAGGACAAAGACATTTAGGACCCTCTACAAGGGGTAAGGCGTACT2210.17520632328341407No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGCCCTCTCTGCTGTTCCTT2210.17520632328341407No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2130.1688640129383131No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1940.15380102586869832No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGCTAATCTGAAATCTTCGTGTTC1900.15062987069614783No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC1840.14587313793732212No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG1830.1450803491441845No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT1820.14428756035104687No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGCTCAGGTAT1680.1331885172471202No Hit
CATAGAGCTTGGGTGCGAACATCAACGCTATACCACACTACACACTCTAT1660.13160293966084494No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1660.13160293966084494No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATTGCTTCTTGTGGTAAC1590.1260534181088816No Hit
CATAGAGAAGACTCCCTCAACCCACCGTTCTACAAAGGATTCTGGGCCAT1550.12288226293633113No Hit
CATAGATCACGTAGAAACTGGAGAGGCTGGTGCATTACAGAGAGGAGATC1520.12050389655691826No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATACGGTAGAGATCCCACCATTTG1500.11891831897064303No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA1490.11812553017750542No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGATGCTGAAGTGATGGGCTAGA1450.11495437500495492No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1400.11099043103926683No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTCCAAGTAATAACCAGGCCCC1370.10861206465985399No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCATCAGGAACCATGGG1360.10781927586671636No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)