FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences126137
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT123589.79728390559471No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG72485.746133172661471No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG60384.786858732964951No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG57444.553778827782491No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG48553.848989590683146No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC41163.263118672554445No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC36922.9269762242640938No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG33932.689932375115945No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC29632.3490331940667684No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA27992.219015831992199No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT26792.1238811768156847No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA26782.1230883880225466No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA26402.0929624138833174No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG24611.9510532199116835No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC22861.8123151811125997No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT19921.5792352759301396No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT19471.5435597802389467No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT18301.450803491441845No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG17961.423848672475166No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC15431.223273107811348No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG11980.9497609741788691No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT11230.8903018146935474No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT10330.8189508233111616No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT10300.8165724569317488No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT7890.6255103577855824No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT7700.6104473707159676No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT7170.5684295646796736No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA7110.5636728319208479No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG6980.5533665776100589No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC6300.49945693967670074No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT6100.48360116381394835No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT6060.48043000864139784No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT5900.46774538795119597No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT5830.4621958663992326No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG5750.45585355605413164No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT5430.4304843146737278No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTCAGACCCAGGCTACACATCTAT5310.4209708491560763No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT5070.4019439181207734No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTATGTGCTCGTATCTTG4470.35437659053251624No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGACCAACATGCTTTTAGTC4450.352791012946241No Hit
CATAGATGGGACAGCGACAATGACAGACACTGTCAGACCCAGGCTACACA4420.35041264656682813No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT4220.33455687070407575No Hit
CATAGATGGGACAGCGACAATGACAGTGTACCCTGGGAGAAGAAATGTTG4180.33138571553152524No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG4160.32980013794525No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAACACTGACGAATGAGGAAACAGG4090.3242506163932867No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTAGCCCGTTCTCTCTGTTGTGT4040.32028667242759856No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGCCTGGCCAACTGTT3940.31235878449622234No Hit
CATAGAGGCTGCAGTGAACAATGATCGCAGTGTACCCTGGGAGAAGAAAT3830.3036381077717085No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG3670.2909534870815066No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCATTAGGAAGTCTTCT3650.2893679094952314No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGGTCCTAAATGTCTT3530.2798544439775799No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGTGTCTGCTGGTCTATGTGTA3430.27192655604620375No Hit
CATAGACCAGTACGCCTTACCCCTTGTACGGTGTCAGACCCAGGCTACAC3400.2695481896667909No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAATCCTGTGTTCATGGCTTCTATG3350.2655842457011028No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG3340.26479145690796513No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTGACAGTTGTGGAAAGTGCAATGA3260.2584491465628642No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG3230.25607078018345136No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA3110.24655731466579986No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGACCATGGAGAGAATA3100.24576452587266226No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG3080.24417894828638703No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCAACATGCTTTTAGT2980.23625106035501084No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT2970.23545827156187318No Hit
CATAGACCAGTTACCACAAGAAGCAATGTCGTCAGTGTATGTGCTCGTAT2910.2307015388030475No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG2770.2196024956991208No Hit
CATAGATGGGACAGCGACAATGACAGTGTATGATGGGAGTGTCTGCTGGT2680.2124673965608822No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCAACATGCTTTTAG2510.19898998707754267No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG2440.19344046552557934No Hit
CATAGACCAGTACGCCTTACCCCTTGTACGGTAGCAGGCCCTTCAGCATC2430.1926476767324417No Hit
CATAGATGCCACCACACCCAGTTAATACACTGTCATTGTGGGTTTTAACT2420.1918548879393041No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAAACTGGCTTGATTGCAC2380.1886837327667536No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGCAGGCCCTTCAGCAT2380.1886837327667536No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAACTGGCTTGATTGCA2300.18234142242165263No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGTGGGTTGAGGGAGT2260.17917026724910218No Hit
CATAGACCAGTACGCCTTACCCCTTGTAGAGGGTCCTAAATGTCTTTGTC2210.17520632328341407No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTACACTGTCATTGTGGGTTTTAA2200.17441353449027644No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGGTGGGTTGAGGGAGTCTTCT2190.17362074569713884No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG2130.1688640129383131No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC2130.1688640129383131No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1990.15776496983438643No Hit
CATAGAACACGAAGATTTCAGATTAGCCTAACACGCACAAAGGCACTGTC1850.14666592673045975No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG1830.1450803491441845No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCATGTGTAGAACCATGTC1810.14349477155790924No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT1810.14349477155790924No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG1780.1411164051784964No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG1750.13873803879908353No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTAGCCCGTT1680.1331885172471202No Hit
CATAGAACTTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG1610.12763899569515685No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTTGATGTTCGCACCCAAGCTCTAT1560.12367505172946876No Hit
CATAGATCTCCTCTCTGTAATGCACCAGCCTCTCCAGTTTCTACGTGATC1520.12050389655691826No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGACAGTTGTGGAAAGTGCAAT1510.11971110776378066No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACGGTGGGTTGAGGGAGTCTTCT1500.11891831897064303No Hit
CATAGATGGCAAATGGTGGGATCTCTACCGTATCACTCTCCCACCATTCA1500.11891831897064303No Hit
CATAGATGGGACAGCGACAATGACAGTGCATAAAAACTGTCGGAGGTCTA1470.11653995259123016No Hit
CATAGATCTAGCCCATCACTTCAGCATCATGCAGGCCCTTCAGCATCATT1430.1133687974186797No Hit
CATAGAGGGGCCTGGTTATTACTTGGAACACCAACATGCTTTTAGTCACG1390.1101976422461292No Hit
CATAGACCTCCCATGGTTCCTGATGACCTCCCATGATTTACCATCACAAA1350.10702648707357873No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT1270.10068417672847776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)