FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804385

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804385
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142438
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA136999.617517797217035No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT51903.643690588185737No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA44693.1375054409637877No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG43723.069405636136424No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA36602.5695390275067047No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT28562.0050829132675267No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT23641.6596694702256423No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG22491.5789325882138192No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG22461.576826408683076No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT19941.3999073281006473No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT16601.165419340344571No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA14861.0432609275614653No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14381.0095620550695743No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA13940.9786714219520073No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA12030.8445779918280234No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA11150.7827967255928896No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC10890.7645431696597818No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC10880.7638411098162008No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC10710.7519060924753226No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT9440.6627444923405271No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT9420.661340372653365No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT9190.6451929962510005No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT9130.640980637189514No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8700.6107920639155282No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT8370.587624089077353No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT8300.5827096701722855No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT8190.5749870118928938No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG7610.5342675409651919No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC7570.5314593015908675No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT7430.5216304637807326No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7260.5096954464398545No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG7250.5089933865962735No Hit
CATAGATCACCAGATGCCAGTTGTGCATTCTCTCAGGGCTGTTCTCTATG6380.4479141802047206No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT6300.4422977014560721No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG6100.4282565045844508No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT6030.4233420856793833No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG6010.4219379659922212No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG5880.41281118802566735No Hit
CATAGAGGCACGATCTTGTTTCACTGTCACTGAGCTGAGGGTCACTTCTA5860.41140706833850516No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC5730.4022802903719513No Hit
CATAGATCACCAGATGCCAGTTGTGCACTCTGTTTACTCGGAGATTTGAC5610.3938555722489785No Hit
CATAGATTCAACCAGCCATCCCCAATACACGGAAGACACAGCACACTCTT5590.3924514525618164No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC5420.38051643522093825No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT5360.37630407615945183No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA5270.36998553756722224No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT5190.3643690588185737No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGCAACATATCAGAAGCATCT5020.3524340414776956No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT5000.3510299217905334No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGGGAAAGGTATGTGGCACATCT4920.34541344304188487No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC4530.31803310914222327No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4450.31241663039357476No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGTTTACTCGGAGATTTGAC4430.3110125107064126No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGTTTTCTGTTTACTCGGAGATTTG4360.3060980918013451No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT4350.3053960319577641No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACAATGCCTCACACACAGGTCT4330.3039919122706019No Hit
CATAGACACACTGACAATTTGCACCTGTACGGCAACATATCAGAAGCATC4190.294163074460467No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA4130.2899507153989806No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT4000.28082393743242673No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3760.26397450118648114No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTCTTACGGCAACATATCAGAAG3730.2618683216557379No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGTGACTAGCACTATTCTCTG3670.2576559625942515No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT3620.2541456633763462No Hit
CATAGACCACACACACAACTGAGAGTATAGCATTCTCTCAGGGCTGTTCT3600.25274154368918406No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGAATCTTTGGGAGGCTATTAGT3580.25133742400202197No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3580.25133742400202197No Hit
CATAGATTCAACCAGCCATCCCCAATCACTGAGCTGAGGGTCACTTCTAT3520.24712506494053554No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTGTCTTCAGCTCTT3510.24642300509695444No Hit
CATAGAGGTGAGCGGCTGTCTCCAACAATGCCTCACACACAGGTCTATGT3480.24431682556621126No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGTCTATGTCCCCAGGTAGCAAAA3440.241508586191887No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCCCCAGGTAGCAAAAC3400.23870034681756272No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCATAGGAGGAGCTGACTTACTG3390.23799828697398168No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGGGAGATCTATGAGAC3330.23378592791249525No Hit
CATAGAGTCCTTCCCTCTCACACATGTGAAGCAGAGGTAGATGGATCATC3310.23238180822533314No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAACAATGCCTCACACACAGGTCTA3310.23238180822533314No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3300.23167974838175207No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT3280.23027562869458992No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG3150.22114885072803606No Hit
CATAGACCATCCCTTCTACAAGAGGCAACACTGAAGCAGAGGTAGATGGA3140.22044679088445499No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCACTGAGCTGAGGGTCACTTC3130.21974473104087394No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATGTCGTCAG3120.21904267119729287No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA3070.21553237197938754No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCAGCATTCTCTCAGGGCTGTTCT3020.21202207276148222No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT2990.209915893230739No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCACTGAGCTGAGGGTCACTTCTA2980.2092138333871579No Hit
CATAGATCCCATACTCCTCCATTACCCTACGATAGCGAGAAGAGTGGAGG2960.2078097136999958No Hit
CATAGACACAGGCCAATCTCAGCAGATACGGCAACATATCAGAAGCATCT2950.20710765385641472No Hit
CATAGAACCAACCTCTCTATCTCCGTACACTAACCTCCCACCCCAGCTGT2950.20710765385641472No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAGAACCATGTCGTCA2910.20429941448209046No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC2900.2035973546385094No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTGCTCCTTCTCACACAAATCT2890.20289529479492835No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT2880.20219323495134725No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC2860.20078911526418514No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATAGCTTACACTGCACATGGG2840.19938499557702297No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGGAATCTTTGGGAGGCTA2840.19938499557702297No Hit
CATAGAGTCCTTCCCTCTCACACATGTGAGTCCATCCAGTCCAGCTCCTT2820.19798087588986085No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA2810.1972788160462798No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT2760.19376851682837445No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTGAGCTGAGGGTCACTTCT2690.18885409792330698No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCCAGGTAGCAAAACAGAGTCTA2660.18674791839256377No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT2600.18253555933107737No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTCTGTTTACTCGGAGA2570.1804293798003342No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA2540.17832320026959098No Hit
CATAGACCATCCCTTCTACAAGAGGCATGTCGTCAGACCTTTTTCTGTAG2540.17832320026959098No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT2520.17691908058242886No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGTAGAGAGTTCTGTAGATGTTC2480.17411084120810458No Hit
CATAGACCATCCCTTCTACAAGAGGCAGAGGAGGAATCTTTGGGAGGCTA2420.16989848214661818No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTGTGTCTTCAGCTCTTTGAG2350.1649840632415507No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA2320.16287788371080753No Hit
CATAGAAACAGCAAAGCCCTCCACCAAGTCCTAACCTCCCACCCCAGCTG2290.1607717041800643No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2280.16006964433648324No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT2280.16006964433648324No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGGAGGAGCTGACTTAC2250.15796346480574003No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG2220.15585728527499684No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT2210.15515522543141577No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT2210.15515522543141577No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTCCTTCCACTACCCACCTGCCT2180.15304904590067256No Hit
CATAGAAGTACCATCAGAGTGAACAGGCACGGCAACATATCAGAAGCATC2180.15304904590067256No Hit
CATAGACCCCCTTGAGTTCACTGGACTGTGTCTTCAGCTCTTTGAGGCAT2180.15304904590067256No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT2170.15234698605709152No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2150.15094286636992937No Hit
CATAGAGCCCCCAGAGAAGAATGACCTACGGTAGCTTACACTGCACATGG2110.14813462699560512No Hit
CATAGAGCCCCCAGAGAAGAATGACCTTCCACTACCCACCTGCCTCTATG2100.14743256715202402No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2060.14462432777769976No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACCAAAATGTCAGGGGATCCTC2010.14111402855979444No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA1990.13970990887263232No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1990.13970990887263232No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1970.13830578918547018No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTACGGCAACATATCAGAAGCA1890.13268931043682164No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGGCATTCTCTCA1890.13268931043682164No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAAAACCCATAGGGCA1860.13058313090607843No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGATAGCGAGAAGAGTGG1850.12988107106249736No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCAGCTTACACTGCACATGGGG1820.12777489153175417No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAACCTCCCACCCCAGCTGTCTATG1800.12637077184459203No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAGAAGTGTATTAA1800.12637077184459203No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTACGGCAACATATCA1790.12566871200101098No Hit
CATAGAAACAGCAAAGCCCTCCACCATACACATAGGAGGAGCTGACTTAC1780.12496665215742989No Hit
CATAGACCACACACACAACTGAGAGTCTCATAGAGCCCCCAGGTAGCAAA1770.12426459231384883No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTACACTGAAGCAGAGGTAGATGG1740.12215841278310563No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA1730.12145635293952456No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGAGTGCTCTCTTTCCCCAGGTAGC1720.1207542930959435No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT1710.12005223325236244No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATGCAGGGCAGAGAGTG1700.11935017340878136No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1700.11935017340878136No Hit
CATAGATACCTGTCCTCTGCCTCGAGCAGCATTCTCTCAGGGCTGTTCTC1680.11794605372161923No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT1670.11724399387803817No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAACTTATCTGGGCACGGTG1660.11654193403445709No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCAGACCTTTTTCTGTAGTC1650.11583987419087603No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTACACATAGGAGGAGCTGACTTA1650.11583987419087603No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT1640.11513781434729496No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1630.1144357545037139No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC1620.11373369466013282No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA1620.11373369466013282No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA1600.11232957497297069No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACGGCAACATATCAGAAGC1600.11232957497297069No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGTCACTGACAGGTCTTAAAG1600.11232957497297069No Hit
CATAGAGGCACAGGGATAATGAGGGAGGATAGCGAGAAGAGTGGAGGCTC1590.11162751512938963No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAAGCCATGCTGAAG1550.10881927575506536No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACGATAGCGAGAAGAG1540.1081172159114843No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1460.10250073716283575No Hit
CATAGAAACAGCAAAGCCCTCCACCATGTCGTCAGTGTAGGAAACATTGG1440.10109661747567363No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCACATAGACCTTTTTCTGTAG1440.10109661747567363No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)