FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804389

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804389
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences168119
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG97875.821471695644157No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT78744.683587220956585No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT72994.341567580106949No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG67233.9989531224906165No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT55483.3000434216239687No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT46502.7658979651318414No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT45602.7123644561292894No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT39552.3525003122788024No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT34522.0533074786312078No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG29961.7820710330182787No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG29671.764821346784123No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT25761.5322479910063704No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG21751.2937264675616675No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT19981.1884438998566493No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC18131.0784027980180706No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG15430.9178022710104152No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT14790.8797339979419341No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG14230.8464242590070128No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT13920.8279849392394673No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC12950.7702877128700504No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT12750.75839137753615No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12460.7411416913019944No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT12150.7227023715344488No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA11990.7131853032673284No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGCTCACGATGGTATT11970.7119956697339385No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT11780.7006941511667331No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG11630.6917718996663078No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT10630.6322902229968058No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT10130.6025493846620549No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT9630.5728085463273038No Hit
CATAGAATAGCTGTGTTGAAGAACCTCACACTGCTCACGATGGTATTACA9440.5615070277600985No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC9020.5365247235589077No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG8990.5347402732588227No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC8420.5008357175572066No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTAGGTGGCTTCTGGTGCAT7710.4586037271218601No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC7480.44492294148787465No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTTGAAAGCTCCCTGGATCTA7450.4431384911877896No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTACGGTTGCAGGATGAATGGGGA7380.4389747738209245No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC7290.4336214229206693No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT6970.41458728638642867No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC6840.40685466841939344No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG6790.40388058458591836No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6520.38782053188515275No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG6500.38663089835176273No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT6370.3788982803847275No Hit
CATAGAACCAACCAATAATAATGTGCTTGTAGGAAACCTGTGTGTGTAAG6340.37711383008464244No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTAAGTGCACAGTTTGGA6290.3741397462511673No Hit
CATAGAACTGTCCCCTACTTTTCACCATACGGTAGCATTCTTTCTCCAGA6280.37354492948447227No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT6270.3729501127177773No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG6240.3711656624176922No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA5930.35272634265014663No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT5580.33190775581582094No Hit
CATAGACTCAGAACTGGCTCTAATTCCTGCTGAAGGATAGTTGGGTGCTC5550.3301233055157359No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTAGCTCACTAGATCTGCTCACGAT5550.3301233055157359No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5420.3223906875487006No Hit
CATAGAACTGACCATACACTTGCCCTGCTCACGATGGTATTACATGGTCT5330.31703733664844547No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA5230.31108916898149525No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT5160.3069254516146301No Hit
CATAGATGGCCCACTGACATTTTCCTAGATGCGCCAGAGTGGGAGTCATT5150.3063306348479351No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTAGCAGAGTGGGAGTCATT5130.305141001314545No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTTGCAGGATGAATGGGGA5060.3009772839476799No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAATCCAAGGTCAAGGGCAGGGATT5050.3003824671809849No Hit
CATAGATGGCCCACTGACATTTTCCTTCTCTGCACAGGACATTGGGGAAT4920.29264984921394965No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC4890.2908653989138646No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG4860.28908094861377953No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4800.2855120480136094No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTCCAAGGTCAAGGGC4760.28313278094682937No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGGATCTCAGAGTTAGCTTGCCTC4710.2801586971133542No Hit
CATAGAACTAGTTCCAGCACCACCAGTATTGTCTGGCACAATGAGGCAAT4710.2801586971133542No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC4660.27718461327987914No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTCTCCCTCTCTCACACATC4630.2754001629797941No Hit
CATAGATCTACTCCTACAATCTTGGCAAAGCAGCAAACAATTTCAGAAAG4610.274210529446404No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG4590.273020895913014No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATTATGTCTGAGGAAGTGACATG4470.2658830947126738No Hit
CATAGATGAGGGATGTAGGCTGTACACACTGCTCACGATGGTATTACATG4460.26528827794597876No Hit
CATAGACAGGGGCCAGAACTCCTAAGAAAGAAAACCCACAAAAGACGTCT4400.26171937734580863No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT4380.26052974381241856No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGCAGACACTTGAAAGC4380.26052974381241856No Hit
CATAGAACTCTTACCCTTTTGCCAGGATACATGTACACGGCAGGACTGTC4340.2581504767456385No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTGACACCAAAAGCACAA4270.25398675937877335No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT4250.25279712584538333No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT4170.2480385917118232No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC4050.24090079051148294No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTATCCCAGTTAGGCTACTTGGGG4020.23911634021139788No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT3960.23554743961122776No Hit
CATAGACAGGGGCCAGAACTCCTAAGGCTGGTAGGTGGCTTCTGGTGCAT3920.2331681725444477No Hit
CATAGAACTGACCATACACTTGCCCTTCTGTCTAGGATGAGATAATTGCC3920.2331681725444477No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG3880.2307889054776676No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTGAACGAAATTTAGGTGAGC3850.22900445517758253No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC3810.22662518811080246No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA3770.22424592104402238No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3760.22365110427732737No Hit
CATAGAACTAGTTCCAGCACCACCAGCATACGGTAGCAGCTCCTCTTCTC3750.22305628751063236No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC3750.22305628751063236No Hit
CATAGACCAGGACAATCACAGGGCACTACGGTTGCAGGATGAATGGGGAC3700.22008220367715725No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTAGGTGGCTTCTGGTGCA3610.21472885277690207No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT3540.21056513541003694No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT3530.20997031864334192No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT3410.2028325174430017No Hit
CATAGATGGCCCACTGACATTTTCCTTACGGTTGCAGGATGAATGGGGAC3380.20104806714291665No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACGGTAGCAGCTCCTCTTCT3370.20045325037622164No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACACTGACGAGCCGTTTCCCCCAT3330.1980739833094415No Hit
CATAGAAAAGGGAGGGATTACGGGTGTACGGTTGCAGGATGAATGGGGAC3330.1980739833094415No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC3310.19688434977605146No Hit
CATAGACTCAGAACTGGCTCTAATTCCTTACGGTAGGTGGCTTCTGGTGC3280.19509989947596643No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT3280.19509989947596643No Hit
CATAGAACTGTCCCCTACTTTTCACCATACGGTAGCAGCTCCTCTTCTCT3240.19272063240918635No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT3200.19034136534240628No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3190.18974654857571127No Hit
CATAGAACTCTTACCCTTTTGCCAGGTACGGTAGCAGCTCCTCTTCTCTT3090.18379838090876105No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTACGGTTGCAGGATGAATG3050.18141911384198098No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCATGTCGTCAGGCGTGT3010.17903984677520088No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT2990.17785021324181086No Hit
CATAGAAAAGGGAGGGATTACGGGTGCTGAAGGATAGTTGGGTGCTCTAT2950.17547094617503078No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACACTGCTCACGATGGTATT2890.17190204557486066No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA2880.17130722880816562No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA2870.1707124120414706No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA2840.16892796174138555No Hit
CATAGAAGGGGTGATGCTCTGATGGACACTGAACGAAATTTAGGTGAGCA2800.16654869467460548No Hit
CATAGAACTGACCATACACTTGCCCTTACGGTTGCAGGATGAATGGGGAC2790.16595387790791047No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC2750.16357461084113037No Hit
CATAGAACTGACCATACACTTGCCCTACACTGCTCACGATGGTATTACAT2730.16238497730774035No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2720.16179016054104534No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTCTGCTTTTACAAACTCAAGTGA2700.16060052700765529No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTCCTCAAGAAAGAAAACCCA2660.15822125994087521No Hit
CATAGATGGCCCACTGACATTTTCCTGTCTCTCCCTCTCTCACACATCTA2630.15643680964079015No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2590.15405754257401008No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2590.15405754257401008No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2550.15167827550723No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCAGGGCTGCATGGTGACTTTTC2310.13740267310654952No Hit
CATAGAGAAGGAAAACTGGGCTGTGGACAGGGGTGTGGTGTTCTGTCTAT2220.13204932220629437No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT2100.12491152100595412No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATAAAGCAGCAAACAATTTCAGAA2040.12134262040578399No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACAGGGGTGTGGTGTTCTGTCT1930.11479963597213877No Hit
CATAGACGTGTGGTTGGGATGTCAGCTACGGTTGCAGGATGAATGGGGAC1910.11361000243874873No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT1880.11182555213866369No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGTCTCTATGTGTAGAAC1870.11123073537196866No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT1820.10825665153849358No Hit
CATAGACAATTTCAGTGCGGCCGATGTGTAGAACCATGTCGTCAGTGTAG1820.10825665153849358No Hit
CATAGACTGGCTATTGTTTGGTTTGTACACGGCAGGGCTGCATGGTGACT1780.10587738447171348No Hit
CATAGAACTCTTACCCTTTTGCCAGGACACATGTACACGGCAGGACTGTC1770.10528256770501847No Hit
CATAGAAAAGTGTATTATGGGCCCAGAGTGGGAGTCATTCATGATCTATG1710.10171366710484836No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)