FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804390

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804390
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences245072
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT160166.535222302017367No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG153986.2830515113925705No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA105294.29628843768362No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA96683.944963112881113No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG70572.879561924658876No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG63092.5743454984657568No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA58002.366651433048247No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA55252.254439511653718No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA53192.1703825814454527No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT50042.041848926029901No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA35431.4456975909120584No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG33461.3653130508585232No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA32581.329405236012274No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT31911.3020663315270615No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT28301.1547626819873342No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA25861.0552001044590977No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC23450.9568616569824379No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT22540.9197297120846117No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT21750.8874942873930927No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA21380.872396683423647No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA20580.8397532153816022No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC20380.831592348371091No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT19390.7911960566690605No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG19080.7785467128027681No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA18700.7630410654827968No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGACATGTGTGAGAGGGAAGGAC18550.7569204152249135No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCATAGAACATTAGCTTAGTT16720.682248482078736No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACATAGAACAGCTAAAA15460.6308350199125154No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC14860.6063524188809819No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG14450.589622641509434No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT13780.5622837370242215No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT13080.5337207024874322No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGAGAGGAGGGGGCAGAATATC12910.5267839655284977No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT12100.4937324541359274No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA11420.46598550630018937No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACCTCGAGGCAGAGGACAGGTAT10950.446807468825488No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT10660.43497421166024675No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT10400.4243650845465822No Hit
CATAGATGCTTCTGATATGTTGCCGTACATAGATGCTCAGATCTCAAAAG10300.4202846510413266No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT10260.41865247763922436No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT9430.3847848795456029No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGCTGAGATTGGCCTGTG9340.3811124893908729No Hit
CATAGATGTGCCACATACCTTTCCCAGTTCAGGGTAATGGAGGAGTATGG9090.3709114056277339No Hit
CATAGACCCCATGTGCAGTGTAAGCTACCGTAGAACATTAGCTTAGTTAA8960.3656068420709016No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT8940.36479075536985045No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG8850.3611183652151205No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGGGTGGGGAAAGAGAGCACTCT8610.351325324802507No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA8570.34969315140040474No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT8540.34846902134882807No Hit
CATAGATGCTTCTGATATGTTGCCGTACTACGGAGATAGAGAGGTTGGTT8390.3423483710909447No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG8120.3313312006267546No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG7670.3129692498531044No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATACGGAGATAGAGAGGTTGGTTC7580.30929685969837434No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG7290.29746360253313314No Hit
CATAGATGCTTCTGATATGTTGCCGTATGGTGGAGGGCTTTGCTGTTTCT7250.2958314291310309No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA7220.2946072990794542No Hit
CATAGATGTGGTCTCAGTGCCCTATGACACTGACGACATGTGTGAGAGGG7190.29338316902787753No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT7050.28767056212051967No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGACCAAAGCTAGAAACTC7040.28726251876999415No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTCGAGGCAGAGGACAGGTAT6780.2766533916563296No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG6720.2742051315531762No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA6680.27257295815107396No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGACACTTTGGACTCTGCCTCTAT5970.2436018802637592No Hit
CATAGAGGATCCCCTGACATTTTGGTTGTACGGTAGCACAACTGGCATCT5950.24278579356270807No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG5910.24115362016060587No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCTACACATAGAACAGCT5880.2399294901090292No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACACATAGAACAGCTA5800.2366651433048247No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG5730.23380883985114576No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA5630.2297284063458902No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGGTGGAGG5610.22891231964483907No Hit
CATAGATGTGGTCTCAGTGCCCTATGTACGGTAGCACAACTGGCATCTGG5580.22768818959326237No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG5570.22728014624273682No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT5550.2264640595416857No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT5380.21952732258275118No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACAGTGAAACAAGAT5340.21789514918064892No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTTCACTCTGATGGTACTTCT5340.21789514918064892No Hit
CATAGAGAACAGCCCTGAGAGAATGCTATTGACTCTCAGTTGTGTGTGTG5280.2154468890774956No Hit
CATAGATGTGGTCTCAGTGCCCTATGTACGGAGATAGAGAGGTTGGTTCT5260.2146308023764445No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA5070.20687797871645885No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGTGTGAG5010.20442971861330547No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA4930.201165371809101No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGTGTGAGAGGG4870.19871711170594766No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG4860.19830906835542209No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG4770.19463667820069203No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGCCTCTTGTAGAAGGG4700.19178037474701312No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA4660.1901482013449109No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGCAAACTAACACAGAAACAGAA4500.18361950773650193No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGTGGAGGGCTTTGCTGT4470.18239537768492523No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTAGGCTGAGAAAGGAGGATCA4370.17831494417966964No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACGGAGATAGAGAGGT4360.1779069008291441No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT4160.1697460338186329No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA4150.16933799046810735No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCCCTCATTATCCCTGTGCCTC4100.16729777371547952No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAGAACAGCTAAAAATCTTG4090.16688973036495397No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA4000.16321734021022394No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA3990.16280929685969836No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCTAACTTCATAGCACATCATG3980.1624012535091728No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGTGTGAGAGGGA3810.1554645165502383No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3800.15505647319971275No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGTCATTCTTCTCTGGGGGC3670.14975190964288046No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC3630.14811973624077823No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT3620.14771169289025265No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT3580.1460795194881504No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGTGAAACAAGATCGTGCCTCT3450.14077495593131814No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTAGACATGTGTGAGAGGGAAGGAC3420.13955082587974146No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG3410.1391427825292159No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG3390.1383266958281648No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG3330.13587843572501143No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTAGGCTGAGAA3320.13547039237448585No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3170.12934974211660247No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGCTGAGAAAGGAGGATCACTCTA3150.12853365541555137No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT3140.1281256120650258No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGTGTGAGAG3090.12608539531239799No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA3060.12486126526082132No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACTGGAGACAGCCGCTC3020.12322909185871907No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT2990.12200496180714239No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT2950.12037278840504016No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT2910.11874061500293791No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG2870.11710844160083567No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2810.11466018149768231No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTACGGTAGCACAACTGGCATCT2790.11384409479663118No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTGGAGACAGCCG2770.11302800809558007No Hit
CATAGATCATGGGACTTCAGCATGGCAAACTAACACAGAAACAGAAAACC2750.11221192139452896No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGCCAACAGTGAAACAAGATCGTG2650.10813148788927336No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT2610.10649931448717112No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG2470.10078670757981327No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)