FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804393

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804393
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences172360
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5760433.42074727314922No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG100395.824437224414017No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG76204.420979345555813No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA58943.419586911116268No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT50982.957762822000464No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC44202.5644000928289628No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG36392.1112787189603157No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG34231.9859596194012532No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG25731.4928057553956835No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT17991.0437456486423764No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT15760.914365281967974No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG12860.7461127871896032No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT10620.6161522394987236No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC9560.5546530517521466No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT9200.5337665351589695No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC8490.4925736829890926No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGACTTGGCCTCAGTTTCCCC7830.4542817359016013No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA7050.4090276166163843No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG6450.37421675562775586No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC6040.3504293339521931No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGAGACTTGGCCTCAGTTTCCCCT5920.3434671617544674No Hit
CATAGATGATGTGAAAAGGACCCATGGTGAGAGAAAACTACCCCAGGCTC5810.33708517057321885No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA5800.3365049895567417No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGCAGAGACTTGGCCTCAGTTTCCC5730.33244372244140175No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATCTATGTGTAGCTTTCTGGG5590.32432118821072176No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG5420.3144581109306104No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTACCTAGTGATTACC5360.3109770248317475No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG5270.3057553956834532No Hit
CATAGACACACCCAACTCTGCTCAGTGTACCTCCAAGCAGATCTGTGTTC5200.30169412856811323No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA5180.30053376653515895No Hit
CATAGACACACCCAACTCTGCTCAGTGTACCAGTGTAGCAGACCATCTTC5070.2941517753539104No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA4820.27964724994198187No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA4760.27616616384311904No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA4730.2744256207936876No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGGCCTCAGTTTCCCCTCC4670.27094453469482477No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA4500.2610814574147134No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC4490.2605012763982362No Hit
CATAGACTGGCGGTGATTGCTTTCCTAGACTTGGCCTCAGTTTCCCCTCC4470.25934091436528195No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA4130.23961475980505917No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG4100.23787421675562775No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA3980.23091204455790207No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC3980.23091204455790207No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG3930.22801113947551635No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTTGGCCTCAGTTTCCC3750.2175678811789278No Hit
CATAGAGCCAAAGAGATGCTGAAAGGGCGAAAGTGATCAGAAGCTCTATG3750.2175678811789278No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA3460.20074263170109072No Hit
CATAGAGGTGAGCGGCTGTCTCCATACCATAGATTTATCCAGCATGCCCC3390.19668136458575075No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG3330.1932002784868879No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG3330.1932002784868879No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA3120.18101647714086794No Hit
CATAGATGATGTGAAAAGGACCCATGGCCATGCTGAAGTCCCATGATCTA3000.17405430494314228No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTTTTAAAATGAGCACCT2990.1734741239266651No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT2910.168832675794848No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA2870.16651195172893943No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGCAAAGCTGCTATGG2740.1589695985147366No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT2660.15432815038291947No Hit
CATAGACACACCCAACTCTGCTCAGTCTACTCAGTCTGCATAGCCACATC2650.15374796936644233No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG2620.15200742631701092No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA2520.1462056161522395No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2430.14098398700394524No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2400.1392434439545138No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTTGCACACTACAATT2360.13692271988860524No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2350.1363425388721281No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2310.13402181480621952No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA2240.12996054769087956No Hit
CATAGACCAGCTTTGCATGAGTGTGGCACATAGATGATGTGGCATGGAGA2220.12880018565792528No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2140.12415873752610815No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG2100.12183801346019958No Hit
CATAGACACACCCAACTCTGCTCAGTGTACTCAGTCTGCATAGCCACATC2000.11603620329542817No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT1990.11545602227895103No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGACTGGCCTCAGTTTCCCCTCCTT1960.1137154792295196No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA1960.1137154792295196No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1950.11313529821304247No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA1950.11313529821304247No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1940.11255511719656533No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT1910.1108145741471339No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG1880.10907403109770249No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCAGTCTGCATAGCCACATCT1880.10907403109770249No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG1820.10559294499883963No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1820.10559294499883963No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)