FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804400

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804400
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89515
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4170046.58437133441323No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG41794.668491314304865No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT21842.439814556219628No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT13821.5438753281572921No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG12481.394179746411216No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC11401.2735295760487069No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA10331.153996536893258No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG9271.0355806289448697No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA8740.9763726749706754No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT8650.9663184941071329No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT7940.8870021784058537No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG5710.6378819192314138No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCAGCACTCATTCTATCTCCTGT5170.5775568340501592No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT4750.5306373233536279No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT4310.481483550242976No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA4250.47478076300061445No Hit
CATAGAGGTGTCCTTTCCCCACTTTAGTGTGCACTTCTCTCTCCTGCCAC4230.47254650058649383No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTATGATGAGGGTATAAGGTCT4100.4580237948947104No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT3920.43791543316762555No Hit
CATAGAACTCCATCATAAGTCAAAGAGCATCTGCAATAGATATTGCTATT3870.4323297771323242No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT3670.4099871529911188No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT3580.3999329721275764No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG3410.3809417416075518No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG3370.3764732167793107No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG3180.3552477238451656No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2990.3340222309110205No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT2840.31726526280511647No Hit
CATAGAAGAGTGAGACTTGAGATGGGACACTGCCATCACAGTTCATTGTA2820.3150310003909959No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG2800.3127967379768754No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGAGGTCAAGGTGGGAGGATGGTCT2470.2759314081438865No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAAATTTGGACCTGCG2400.26811148969446463No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA2350.26252583365916327No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT2290.25582304641680165No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2260.25247165279562084No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC2040.22789476624029492No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2030.22677763503323464No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1920.2144891917555717No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1820.203317879684969No Hit
CATAGATGAAAGACAAGCAGGGAAGCAGGTAGAAAATGGCATTTGACAGG1760.1966150924426074No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT1740.19438083002848683No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1690.18879517399318552No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTATAAAAAATATGCAAAATTA1670.18656091157906496No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1650.18432664916494443No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1650.18432664916494443No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCCAGTAGCAAGAT1640.18320951795788415No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1600.1787409931296431No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1560.174272468301402No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1500.16756968105904038No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1470.16421828743785957No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG1470.16421828743785957No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1340.14969558174607606No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTACAGATTTGGACCTGCG1340.14969558174607606No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC1310.14634418812489527No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1300.145227056917835No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1290.14410992571077474No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1270.1418756632966542No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1260.1407585320895939No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC1250.13964140088253366No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1230.1374071384684131No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1230.1374071384684131No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTCTTGCCTCCGTCCCTCTATGA1210.13517287605429257No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1190.13293861364017204No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1160.12958722001899123No Hit
CATAGACACATGTAGGATGGGGTGGCTGGAGGGTGTCCTCAGGTCAAGGT1100.12288443277662961No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1090.12176730156956934No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1080.12065017036250907No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1070.11953303915544881No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1070.11953303915544881No Hit
CATAGAACCAAAAATGGCTAGGCATGTTTATCATTGGCTGTCATGATTAT1070.11953303915544881No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC1060.11841590794838854No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTAGCTGTGCTGGGTAG1050.11729877674132828No Hit
CATAGACACATGTAGGATGGGGTGGCACATGCCAGCTACTCAGGAGGTCA1050.11729877674132828No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC1030.11506451432720773No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT1010.11283025191308718No Hit
CATAGACACATGTAGGATGGGGTGGCACTGGCTGGCAACACCCAGAGGCT960.10724459587778586No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA960.10724459587778586No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG930.10389320225660503No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG920.10277607104954475No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)