FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804402

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804402
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105360
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1811517.193432042520882No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA43634.1410402429764614No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG33103.1416097190584664No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA30042.8511769172361427No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA29952.8426347760060744No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG28632.717350037965072No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT26742.537965072133637No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT24602.334851936218679No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG22742.1583143507972666No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT14711.3961655277145026No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA11781.1180713743356112No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA11481.0895975702353835No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA11211.0639711465451784No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC10851.0298025816249052No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG10180.966211085801063No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA9740.9244495064540623No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT7640.7251328777524677No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7630.7241837509491268No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7580.7194381169324222No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7410.7033029612756264No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA7310.6938116932422171No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC7080.6719817767653758No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT7020.6662870159453302No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA7020.6662870159453302No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6170.5856112376613516No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC6050.5742217160212605No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG5940.5637813211845102No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA5280.5011389521640092No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT5250.49829157175398636No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCCTTGGAGAGAAATGCTGCT4710.44703872437357633No Hit
CATAGACCCCATGTGCAGTGTAAGCTCACATAGACATGTGTGAGAGGGAA4460.4233105542900532No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG4430.42046317388003035No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC4110.39009111617312076No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGTCATTCTTCTCTGGGGGC4040.38344722854973423No Hit
CATAGACCTGTGTGTGAGGCATTGTTCATAGAACAGCTAAAAATCTTGGA4020.3815489749430524No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3940.37395596051632496No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA3880.3682611996962794No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCTTGTAGAAGGGATGGTCTATG3700.35117691723614275No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3680.3492786636294609No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT3660.34738041002277903No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT3620.3435839028094153No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGACTCTGCTGAGATTGGCCTGTG3560.33788914198936976No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGAACAGTGAAACAAGATCGTGCC3420.3246013667425968No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT3400.322703113135915No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3340.31700835231586943No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3320.31511009870918755No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGAACAGCTAAAAATCTTGGAGC3220.3056188306757783No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC3180.30182232346241455No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3060.29043280182232345No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCACATAGAACAGCTAAA2930.2780941533788914No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT2760.2619589977220957No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA2660.2524677296886864No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA2650.2515186028853455No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACATAGAACAGCTAAAAATCTTG2600.24677296886864084No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2590.24582384206529992No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2540.24107820804859528No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA2530.24012908124525437No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG2520.23917995444191342No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG2520.23917995444191342No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGAACAGTGAAACAAGATCGTGC2490.23633257403189067No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2480.2353834472285497No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG2460.23348519362186787No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC2440.23158694001518604No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT2440.23158694001518604No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2430.23063781321184512No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT2430.23063781321184512No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA2370.22494305239179954No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACAGTGAAACAAGATCGTGCCTC2370.22494305239179954No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGGCACAACTGGCAT2340.22209567198177677No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA2330.22114654517843582No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA2140.20311313591495822No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC2140.20311313591495822No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC2140.20311313591495822No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAACAGCTAAAAATCTTGGAG2090.19836750189825358No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTAGCACAACTGGCATCTGGT2040.19362186788154898No Hit
CATAGAACATCTACAGAACTCTCTACCCACACTGACGACATGGTTCTACA2030.19267274107820806No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACATTAGCTTAGTTAATTA2010.1907744874715262No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT2000.18982536066818526No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA1990.18887623386484434No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGAGCAAACTAACACAGAA1970.18697798025816248No Hit
CATAGATGTGGTCTCAGTGCCCTATGAAGAACAGCTAAAAATCTTGGAGC1970.18697798025816248No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGGACACTTTGGACTCTGCCTCTA1970.18697798025816248No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCGACATGTGTGAGAGGGAAG1960.18602885345482156No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG1950.18507972665148065No Hit
CATAGAAGGAGCTGGACTGGATGGACAGGCAGGTAGGAAGGCCACAGGCC1930.1831814730447988No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCACATCTACAAGGACACTCATCT1920.18223234624145787No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCTACACATAGAACAGCT1850.17558845861807137No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1820.17274107820804857No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1730.16419893697798027No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGAACATTAGCTTAGTTAATT1710.1623006833712984No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1690.16040242976461655No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGCTACCGTAGCACAACTGGCA1640.1556567957479119No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGGTCATTCTTCTCTGGGGGCT1620.15375854214123005No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTCTATGAGACCAAA1570.14901290812452544No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTATAGACATGTGTGAGAGGGAA1560.1480637813211845No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTCTGGTGGAGGGCT1560.1480637813211845No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT1500.14236902050113895No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGTGTGAGAGGG1440.1366742596810934No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCTGCTGAGATTGGCCTGTGT1430.13572513287775245No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACATAGAACAGCTAA1390.13192862566438876No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1360.12908124525436598No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1340.12718299164768415No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACGCAAACTAACACAGA1330.1262338648443432No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGGTTCTAC1320.1252847380410023No Hit
CATAGAGAACAGCCCTGAGAGAATGAGAACAGCTAAAAATCTTGGAGCTC1290.1224373576309795No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATAGAACAGCTAAAAATCTTG1270.12053910402429764No Hit
CATAGAGAACAGCCCTGAGAGAATGCATGGTTCTACACATAGAGAACAGC1270.12053910402429764No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGAGAGGAGGGGGCAGAATATCTA1260.11958997722095671No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGTTCACTCTGATGGTACTTCTATG1250.1186408504176158No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC1230.11674259681093394No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1230.11674259681093394No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1210.1148443432042521No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATAGGGTGGGGAA1200.11389521640091116No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG1190.11294608959757024No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTCTACACATAGAACAGC1170.11104783599088838No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATAGGGTGGGGAAAGAGA1170.11104783599088838No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC1160.11009870918754745No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG1160.11009870918754745No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTACACATAGAACAGCTAAAAATC1150.10914958238420654No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACTCTATGAGACCAAGTCTCTGC1140.10820045558086559No Hit
CATAGATCATGGGACTTCAGCATGGCACAACTGGCATCTGGTGATCTATG1140.10820045558086559No Hit
CATAGACCAAAGCTAGAAACTCCCATCTATGAGACCAAGTCTCTGCTACC1130.10725132877752468No Hit
CATAGATGCTTCTGATATGTTGCCGTGGTTCTACACATAGATGCTCAGAT1130.10725132877752468No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATATTGGGGATGGCTGGT1120.10630220197418376No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACACGGACTACAAG1110.10535307517084282No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGAGACCA1100.1044039483675019No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGTCATTCTTCTCTGG1100.1044039483675019No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC1100.1044039483675019No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAACATGTGTGAGAGGGAAGGA1080.10250569476082005No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCAGGGAAGCCCACACTTAGAAATG1070.10155656795747911No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)