FastQCFastQC Report
Wed 8 May 2024
EGAF00005804403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105360
Total Bases15.8 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1752616.634396355353076No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT42294.013857251328778No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG32973.129271070615034No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA29812.8293470007593013No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA29542.8037205770690967No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG28012.6585041761579347No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT25642.433561123766135No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT24512.3263097949886102No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG22472.1326879271070616No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT14311.3582004555808656No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA11211.0639711465451784No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA11211.0639711465451784No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA10861.030751708428246No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA10581.0041761579347002No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG9770.927296886864085No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA9710.9216021260440395No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT7690.7298785117691724No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7600.721336370539104No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT7480.7099468488990129No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA7080.6719817767653758No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG7060.670083523158694No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT6930.657744874715262No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT6930.657744874715262No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT6880.6529992406985573No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA5990.5685269552012149No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG5770.5476461655277145No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC5750.5457479119210327No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5240.49734244495064545No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT5040.47835990888382685No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCAGCATTCTCTCAGGGCTGTTCT4740.4498861047835991No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGAGCTTACACTGCACAT4490.42615793470007596No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGTTTACTCGGAGATTTGAC4460.4233105542900532No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAACAATGCCTCACACACA3990.3787015945330296No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3960.3758542141230068No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC3890.3692103264996203No Hit
CATAGAGCCCCCAGAGAAGAATGACCTACGATAGCGAGAAGAGTGGAGGC3870.3673120728929385No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA3650.3464312832194381No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT3580.33978739559605164No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG3570.3388382687927107No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT3570.3388382687927107No Hit
CATAGACACAGGCCAATCTCAGCAGAGTCTCCCCAGGTAGCAAAACAGAG3570.3388382687927107No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT3500.3321943811693242No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGATAGCGAGAAGAGTGGAGGC3460.32839787395596054No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA3370.3198557327258922No Hit
CATAGAGGCACGATCTTGTTTCACTGTTCCCCCCAGGTAGCAAAACAGAG3340.31700835231586943No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3300.31321184510250566No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACCCCAGGTAGCAAAACAGAG3160.2999240698557327No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC3150.2989749430523918No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3050.28948367501898253No Hit
CATAGAGGCACAGGGATAATGAGGGAGGCTATTAGTCTATGTGTAGAACC2970.2818906605922551No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGACTCTGTTTACTCGGA2860.2714502657555049No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT2710.25721336370539105No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT2530.24012908124525437No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCCCCAGGTAGCAAAAC2520.23917995444191342No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC2510.2382308276385725No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA2500.2372817008352316No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA2500.2372817008352316No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG2480.2353834472285497No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2450.23253606681852695No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2420.2296886864085042No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT2410.22873955960516323No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC2410.22873955960516323No Hit
CATAGAGGCACGATCTTGTTTCACTGTACGGAAGACACAGCACACTCTTC2390.2268413059984814No Hit
CATAGAGGCACGATCTTGTTTCACTGTTCTACCCCAGGTAGCAAAACAGA2380.22589217919514049No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA2360.22399392558845863No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT2340.22209567198177677No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT2330.22114654517843582No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT2280.21640091116173119No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT2270.21545178435839027No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA2250.21355353075170844No Hit
CATAGATCACCAGATGCCAGTTGTGCCTCATAGAGGAGAATGATATTGTT2240.21260440394836752No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2240.21260440394836752No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCATTCTCTCAGGGCTGTT2140.20311313591495822No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA2100.19931662870159456No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGATAGCGAGAAGAGTGGAGGC2020.19172361427486712No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT2010.1907744874715262No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG2010.1907744874715262No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATGTCGTCAG2010.1907744874715262No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA1960.18602885345482156No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC1960.18602885345482156No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATAGGAGGAGCTGACT1950.18507972665148065No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTCATAGGGCACTGAGACCACA1950.18507972665148065No Hit
CATAGATCACCAGATGCCAGTTGTGCTACAGGAATCTTTGGGAGGCTATT1950.18507972665148065No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCATAGACCTTTTTCTGT1940.1841305998481397No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGAGACCTTTTTCTGTAGTCAAG1910.18128321943811693No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACAATGCCTCACACACAGGTCT1870.17748671222475323No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1840.17463933181473046No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCCCCAGGTAGCAAAACAGAGTCTA1810.17179195140470765No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGGAGACTCCAGGCCTGTGGCCTTC1730.16419893697798027No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGAGGAGGAGCTGAC1720.16324981017463933No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1690.16040242976461655No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAGAAGTGTATTAA1690.16040242976461655No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1670.15850417615793472No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGTAGCAGGAATCTTTGGGAG1610.15280941533788914No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT1580.14996203492786636No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATAGGAAACATTGGAAAGATG1580.14996203492786636No Hit
CATAGATCCCATACTCCTCCATTACCCTTTGGTCTCATAGAGGTTTTCTG1560.1480637813211845No Hit
CATAGAAACAGCAAAGCCCTCCACCAGAGGTTTTCTGTTTACTCGGAGAT1540.14616552771450267No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1500.14236902050113895No Hit
CATAGACACAGGCCAATCTCAGCAGAGGGTCACTGACAGGTCTTAAAGCT1400.13287775246772968No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGTGTATTAATT1400.13287775246772968No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAGGAGCTGACT1390.13192862566438876No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1330.1262338648443432No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1320.1252847380410023No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT1310.12433561123766136No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGCATT1290.1224373576309795No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCATTCTCTCAGGGCTGTTCTC1280.12148823082763857No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCACTGAGCTGAGGGTCACTTCTA1280.12148823082763857No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCGTTTTCTGTTTACTCGGA1270.12053910402429764No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1270.12053910402429764No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAATCTTTGGGAGGCTA1250.1186408504176158No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC1250.1186408504176158No Hit
CATAGAAGTACCATCAGAGTGAACAGGAGGAGCTGACTTACTGTTCTATG1210.1148443432042521No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT1200.11389521640091116No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG1190.11294608959757024No Hit
CATAGAGTGCTCTCTTTCCCCACCCTATGATGTGCTATGAAGCAGAGGTA1190.11294608959757024No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1180.11199696279422931No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA1170.11104783599088838No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCACGGCAACA1170.11104783599088838No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG1160.11009870918754745No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGCCCCAGGTAGCAA1160.11009870918754745No Hit
CATAGATCACCAGATGCCAGTTGTGCCATGCTGAAGTCCCATGATCTATG1150.10914958238420654No Hit
CATAGAGTGCTCTCTTTCCCCACCCTATAGAGGAGAATGATATTGTTGCA1150.10914958238420654No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGCAGGGCAGAGA1120.10630220197418376No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGTGCCCGGCTTCCTTGGGACA1100.1044039483675019No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGAAGTGTATTA1090.10345482156416097No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTTGGTCTCATAGAGCCCCCAGAGG1080.10250569476082005No Hit
CATAGAGTCCTAACCTCCCACCCCAGCTGTCTATGTGTAGAACCATGTCG1070.10155656795747911No Hit
CATAGATTCAACCAGCCATCCCCAATATAGAGGAGAATGATATTGTTGCA1060.1006074411541382No Hit
CATAGAGTCCTTCCCTCTCACACATGTTACGATAGCGAGAAGAGTGGAGG1060.1006074411541382No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)