FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences193345
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6164831.884972458558536No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG99965.170032842845691No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG76673.965450360754092No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA68743.555302697251028No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC60963.152913186273242No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT58023.0008533967777806No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG48512.5089865266751143No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG40862.1133207478859033No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT32881.7005870335410795No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC21181.095451136569345No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG18950.980113269026869No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG16760.8668442421578009No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT14610.7556440559621402No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT13490.6977165171067263No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA11290.5839302800693061No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT11150.5766893377123794No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG10340.5347953140758748No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC9330.48255708707233186No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT9310.48152266673562805No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA8860.4582482091597921No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTTGGCCTCAGTTTCCC8290.42876722956373325No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC8260.42721559905867745No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGATCTATGTGTAGAACCATGTC8080.4179058160283431No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGAGCAGAGCTTGGCCTCAGTTT7930.4101476635030645No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACACC7610.3935969381158033No Hit
CATAGATGACCTGTTAATCTGCCCCCTGACTTGGCCTCAGTTTCCCCTCC7320.37859784323359796No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC7200.37239132121337504No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGACTTGGCCTCAGTTTCCCCTCCT7090.36670200936150404No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA6960.35997827717292924No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA6620.34239313144896427No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTGGGAAGTAGGGAAT6350.32842845690346273No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGAGACTTGGCCTCAGTTTCCCC6210.321187514546536No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG6060.3134293620212573No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGACCAAGGGCCTGTGTTCTT5870.303602368822571No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA5850.3025679484858672No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT5750.2973958468023481No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGACTTGGCCTCAGTTTCCCC5450.28187954175179086No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA5080.2627427655227702No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTACGGTAGCAAAG5050.26119113501771446No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA4940.2555018231658434No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC4820.24929530114562054No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG4780.2472264604722129No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA4550.23533062660011897No Hit
CATAGACTGGCGGTGATTGCTTTCCTACACTGATGTGGCATGGAGAAGGG4350.22498642323308077No Hit
CATAGACACACCCAACTCTGCTCAGTGATGTGGCATGGAGAAGGGTCTAT4290.22188316222296933No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGGCAAAGCTGC4180.2161938503710983No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC4010.20740127750911586No Hit
CATAGATGACCTGTTAATCTGCCCCCGTATGAATGTTGGAGAGGCACATC3940.20378080633065243No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATGTGGCATGGAGAAGGGTCT3890.2011947554888929No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG3860.19964312498383716No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGTGATGTGGCA3660.18929892161679898No Hit
CATAGACCAGCTTTGCATGAGTGTGGGGAAGTAGGGAATGATTACAAGTT3450.17843750808140887No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG3280.1696449352194264No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG3100.16033515218909203No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA2940.15205978949546148No Hit
CATAGATACGATCATAAGGGTGGGGCCTGTGTTCTTTGCATGATCTATGT2920.15102536915875764No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACCACCAGTGTAGCAGACCATCT2920.15102536915875764No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC2910.15050815899040576No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGAGACACTGGGGGCACAAAGT2830.14637047764359046No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2770.14326721663347902No Hit
CATAGATGACCTGTTAATCTGCCCCCCTTGGCCTCAGTTTCCCCTCCTTC2720.14068116579171946No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2700.13964674545501565No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2690.13912953528666375No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA2680.13861232511831184No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG2670.1380951149499599No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA2590.13395743360314463No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT2520.13033696242468126No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG2520.13033696242468126No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTTAGGTCA2500.12930254208797745No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA2500.12930254208797745No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2280.11792391838423544No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG2270.11740670821588353No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATTACAAGTTCTATGTGTAGA2250.11637228787917969No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA2230.1153378675424759No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT2150.11120018619566059No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA2130.1101657658589568No Hit
CATAGATGATGTTTTAAAATGAGCACCTAACATCTATGTGTAGAACCATG2120.10964855569060487No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA2110.10913134552225295No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTTGGCCTCAGTTTCCCC2110.10913134552225295No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT2090.10809692518554916No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2050.10602808451214152No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG2040.1055108743437896No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT2030.10499366417543769No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG1970.10189040316532622No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1950.10085598282862242No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)