FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804412

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804412
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55346
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAACAGGGACTCTCATTCACTGCTGGTGGGAATGCAAACTGGA657611.881617461063131No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC31075.613775159903154No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT26284.748310627687638No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT26044.704947060311495No Hit
CATAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA24074.349004444765656No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA23124.177356990568424No Hit
CATAGAGGATCCCATCTGAGTTGGTCAAAGTCTGTGAGTAAAGTGCTAAT18773.391392331875836No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC17723.201676724605211No Hit
CATAGAAACCCCAAAGGCTATGTTCATTCTATGCCTTCATTCTGCCTGCA16653.0083474867199076No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT12472.253098688252087No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT11462.070610342210819No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA10891.96762186969248No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATATGTCTTTATCAGCAGCATT10611.91703104108698No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA9911.7905539695732302No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT9751.7616449246558017No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG9651.7435767715824089No Hit
CATAGATGTATACAAGCTGTCACAGACAACATTTTTCTTCATTCAGCAAC8831.5954179163805877No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA8081.4599067683301412No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT7321.3225888049723558No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA7101.2828388682108913No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA6581.1888844722292486No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG6071.0967368915549451No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT5310.9594189281971597No Hit
CATAGAGCTGGCTTCCTAACTTCCAACCTTCCAGCAAGCCTATTAACCTT4540.8202941495320349No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT3810.6883966320962671No Hit
CATAGATTCTGAAGAAATCAGATAGAGAGAAACAAATATGCTCCAAATTT3700.668521663715535No Hit
CATAGAGATGTTTGATAAGCAGGGTGACTAGAGTTAATGGTAATTTATTG3510.6341921728760886No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA2930.5293968850504102No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG2880.5203628085137137No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA2840.5131355472843566No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA2710.4896469482889459No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2130.38485166046326746No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1970.3559426155458389No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT1930.34871535431648176No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC1880.33968127777978535No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1790.3234199400137318No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCGTCTCTACTAAAAATT1780.3216131247063925No Hit
CATAGATGAAAGCCTGTTGAATTTATGACATTTTTTATTCTCTCTCTTCA1660.29993134101832114No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTCAGCTCTACAAAAAATA1630.29451089509630324No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA1560.28186318794492826No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG1530.2764427420229104No Hit
CATAGATCATGGGACTTCAGCATGGCCAACAGGTGAAACCCCGTCTCTAC1400.25295414302749974No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA1400.25295414302749974No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGAGTT1360.2457268817981426No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC1180.2132042062660355No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1170.2113973909586962No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG1160.20959057565135691No Hit
CATAGACACCATGCCTGGCTAATTTTTGCATTTTTAGTACAGATGGAGTT1090.19694286849998194No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT1050.1897156072706248No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA1030.18610197665594624No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1020.18429516134860693No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCTCATAGACATGCTTCCTTCT1010.18248834604126765No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA940.16984063888989268No Hit
CATAGAGAGATTTTGGGCTGAGACAATGAGGTTTTCTAAATATACAATCA900.16261337766053555No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA840.15177248581649982No Hit
CATAGAGAGATTTTGGGCTGAGACAATAATGCCGCATATCTACAACTATC830.14996567050916057No Hit
CATAGATGCCCTTTTTGTGTACTTCCATTCTACACATAGATGCCCTTTTT810.146352039894482No Hit
CATAGAGCGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC800.1445452245871427No Hit
CATAGAGCAACAGGGACTCTCATTCAATAATAAATGACCTTCTCTTCTGT800.1445452245871427No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG760.13731796335778557No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA750.13551114805044628No Hit
CATAGAGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACACTCA730.13189751743576772No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGATACGGGGTT710.12828388682108915No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA700.12647707151374987No Hit
CATAGACCCCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT680.1228634408990713No Hit
CATAGAGCGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA640.11563617966971416No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG590.10660210313301775No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCTTGGTCTCATAGAATCCTTTC590.10660210313301775No Hit
CATAGAGATGTTTGATAAGCAGGGTGTTGATTGTGTTATTGGTAAGGGTC590.10660210313301775No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT580.10479528782567846No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)