FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804416

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804416
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7951
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG425653.527858131052696No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA2693.383222236196705No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG2012.527983901396051No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC1591.9997484593132937No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG1511.899132184630864No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC1381.7356307382719156No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG1181.4840900515658406No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA981.232549364859766No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG600.7546220601182241No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT540.6791598541064017No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA520.6540057854357942No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC490.616274682429883No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA440.5533895107533644No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG410.5156584077474532No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT380.47792730474154194No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG360.4527732360709345No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA330.41504213306502324No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG320.4024650987297196No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT320.4024650987297196No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT250.3144258583825934No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG240.30184882404728963No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGGCTAATCTGAAATCTT230.2892717897119859No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG230.2892717897119859No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG220.2766947553766822No Hit
CATAGATCATGGGACTTCAGCATGGCTTTTGTCTCCCTGCATGCCCAGAA220.2766947553766822No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGACATGGTTCTACACA220.2766947553766822No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG210.26411772104137843No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG190.23896365237077097No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG190.23896365237077097No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG190.23896365237077097No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG190.23896365237077097No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTAGACCTGCG190.23896365237077097No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG180.22638661803546725No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG180.22638661803546725No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC170.2138095837001635No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG150.18865551502955602No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA150.18865551502955602No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG150.18865551502955602No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC140.1760784806942523No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC140.1760784806942523No Hit
CATAGAAATGATGCTGAAGGGCCTGCGACATGGTTCTACACATAGAAATG130.16350144635894856No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG130.16350144635894856No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT130.16350144635894856No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT130.16350144635894856No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC110.1383473776883411No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGTGTCTGTTTCCCCACTCAAATA110.1383473776883411No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTACAGATTTGGACCTGCG110.1383473776883411No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA110.1383473776883411No Hit
CATAGATCATGGGACTTCGGCATGGCGGTGTTTGCAGATTTGGACCTGCG100.12577034335303736No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT100.12577034335303736No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG100.12577034335303736No Hit
CATAGATCATGGGGCTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG90.11319330901773363No Hit
CATAGACACAACAGAGAGAACGGGCTGATGTTCTTCCTTTTCTGCCTTCA90.11319330901773363No Hit
CATAGAAATGATGCTGAAGGGCCTGCCTGACGACATGGTTCTACACATAG90.11319330901773363No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGAACCTGCG90.11319330901773363No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG80.1006162746824299No Hit
CATAGGTCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG80.1006162746824299No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG80.1006162746824299No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGTTTTGGACCTGCG80.1006162746824299No Hit
CATAGATCATGGGACCTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG80.1006162746824299No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTATGCAGATTTGGACCTGCG80.1006162746824299No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA80.1006162746824299No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG80.1006162746824299No Hit
CATAGAAATGATGCTGAAGGGCCTGCCTACACATAGAGTGTCTGTTTCCC80.1006162746824299No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG80.1006162746824299No Hit
CATAGATCCACGTGAGAATAAAGCATACACCCACAGCCAGGAAAGAATCT80.1006162746824299No Hit
CATAGATCCACGTGAGAATAAAGCATACACACTGACGACATGGTTCTACA80.1006162746824299No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)