FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804418

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804418
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences169030
Sequences flagged as poor quality0
Sequence length150
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC95415.644560137253742No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA75074.441223451458321No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA71574.2341596166361No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC68654.061409217298705No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA51403.040880317103473No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA43472.5717328284919834No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT43422.5687747737088094No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA35992.129207832929066No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG32751.937525882979353No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA29911.7695083712950361No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG29311.7340117138969415No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT24281.4364314027095781No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA23031.3624800331302136No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC19331.1435839791752942No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA18831.1140034313435485No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA17781.0518842808968822No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT17361.0270366207182156No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC16911.0004141276696445No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG15160.8968822102585339No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT14580.8625687747737087No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG13750.8134650653730107No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT13040.7714606874519316No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA12850.7602200792758682No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA12030.711707980831805No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT11720.6933680411761226No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11560.6839022658699639No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA11470.6785777672602497No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC11060.6543217180382181No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG10830.640714666035615No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG10780.6377566112524404No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT10320.6105425072472341No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG9690.5732710169792344No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAACAAGCACATTATTATTGG9460.5596639649766313No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT9380.554931077323552No Hit
CATAGATGTGTGAGAGAGGGAGAGACAATGGGCACACTTAACACCTCTAT9350.5531562444536473No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG9080.5371827486245045No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC8100.47920487487428265No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA8060.476838431047743No Hit
CATAGAACCCTGCTTCCTAAATCAACAGGAAAATGTCAGTGGGCCATCTA7890.4667810447849494No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT7720.45672365852215585No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC7680.4543572146956162No Hit
CATAGATTTGGCACTCACATACACGCACACTGACAATGGGCACACTTAAC7600.44962432704253685No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGGGCAAGTGTATGGTCA7550.4466662722593623No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT7510.4442998284328226No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA7290.4312843873868544No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTGGTGGTGCTGGAACTAG7120.4212270011240608No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT7120.4212270011240608No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG7020.41531089155771167No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC6840.4046618943382831No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT6830.40407028338164824No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG6520.3857303437259658No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT6430.3804058451162516No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA6360.3762645684198071No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA6330.3744897355499024No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6250.36975684789682306No Hit
CATAGATCATGAATGACTCCCACTCTGATCTAGCTTCGGAATGTTTTCAT6070.35910785067739454No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5670.3354434124119979No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA5570.32952730284564874No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT5520.3265692480624741No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC5410.32006152753949No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT5310.3141454179731409No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGTCCTTGCACACCATGGATC5250.31059575223333136No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTTGGGGGAAGAGAAACAGAAT5180.30645447553688693No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG5090.3011299769271727No Hit
CATAGATTGCCTCATTGTGCCAGACAAGCACATTATTATTGGTTGGTTCT5080.3005383659705378No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4970.2940306454475537No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT4720.27924037153168074No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACGCTGACATCCCAACCACAC4560.2697745962255221No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTGGTGGTGCTGGAACT4490.2656333195290777No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGTTTTCCGGCTTGAGGTTC4440.2626752647459031No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC4390.2597172099627285No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA4390.2597172099627285No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT4370.2585339880494587No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG4330.256167544222919No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG4230.25025143465656985No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT4200.2484766017866651No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT4180.24729337987339528No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCACAGCCCAGTTTTCCTTCTCTA4090.241968881263681No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTTGGGGGAAGAGAAACAG4090.241968881263681No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG4070.24078565935041116No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4050.23960243743714132No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4050.23960243743714132No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC4040.23901082648050642No Hit
CATAGACAGTCCTGCCGTGTACATGTGTAGTATCTCAACTCCCAGCTCCT4040.23901082648050642No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC4030.2384192155238715No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA3940.23309471691415726No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG3930.23250310595752233No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATATGGTGAAAAGTAGGGGACAG3890.23013666213098266No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT3830.22658699639117313No Hit
CATAGACAGTCCTGCCGTGTACATGTACACTGACGACATGTACAAACCAA3660.21652961012837957No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT3610.213571555345205No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCAAACAGAATGGGACCCATCTAT3560.2106135005620304No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA3490.206472223865586No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGGTGCTGGAACTAGTTCTA3470.20528900195231617No Hit
CATAGACAGTCCTGCCGTGTACATGTGACCATGTAATACCAGCATGAGAA3410.20173933621250667No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3360.19878128142933205No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT3280.19404839377625274No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA3070.18162456368691948No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTCCAACTCTATAGATTAT3060.18103295273028455No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACATGAACAAGGGCATGGTCA3060.18103295273028455No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTAGCTCCACAAGCACATTATTATT3040.17984973081701475No Hit
CATAGACAGTCCTGCCGTGTACATGTATTATCTCAACTCCCAGCTCCTTC2930.17334201029403065No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTACCACAATGGGCACACTTA2910.17215878838076082No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTATTCCAACTCTATAGATTAT2810.16624267881441165No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTCAGAAATGCAAACAGAATGG2790.16505945690114182No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCTTAGGAGTTCTGGCC2730.1615097911613323No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT2730.1615097911613323No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATGGGAGGAACAGGGAGATG2680.15855173637815773No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTCTGGTGGTGCTGGAACT2600.15381884872507837No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG2580.15263562681180853No Hit
CATAGACCCCCATGCAACCACATCTACGCTGACATCCCAACCACACGTCT2510.14849435011536413No Hit
CATAGATCTGGGAGGTGAAGAGGACATAGGAAAATGTCAGTGGGCCATCT2480.1467195172454594No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCACAATGGGCACACTTAACAC2410.14257824054901497No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGTGGTCTCATAGATTCCCCCCTT2410.14257824054901497No Hit
CATAGACAGAACACCACACCCCTGTCTACTTAGGAGTTCTGGCCCCTGTC2390.14139501863574513No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGAAAAGTAGGGGACAGTTCTAT2380.14080340767911023No Hit
CATAGAACTTGTGCTTTTGGTGTCACTGTACTCCAGTCTCGGCAACAAGT2360.13962018576584037No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCAGCATGAGAAGAATGGCCTCTA2330.13784535289593564No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2320.1372537419393007No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGAAAAGTAGGGGACAGTTCTA2280.13488729811276104No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT2200.1301544104596817No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2130.12601313376323728No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2100.12423830089333256No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATACAATGGGCACACTTAACACC2040.12068863515352304No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT1960.11595574750044371No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA1950.1153641365438088No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT1830.10826480506418978No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT1800.10648997219428503No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTTGTCCTTGCACACCATGG1790.10589836123765012No Hit
CATAGAATCCCTGCCCTTGACCTTGGAGATCTGGGAGGAACAGGGAGATG1750.10353191741111045No Hit
CATAGAATTGCCTACTTTGGGACCCACAGCCCAGTTTTCCTTCTCTATGA1750.10353191741111045No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA1730.10234869549784062No Hit
CATAGATCTGCTCACCTAAATTTCGTTCACACTGACGACAATGGGCACAC1720.10175708454120569No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1710.10116547358457077No Hit
CATAGATCTGGGAGGTGAAGAGGACAGTGATATGTGTTTGGGGGAAGAGA1710.10116547358457077No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)