FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804422

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804422
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15936
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG831952.202560240963855No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA4322.710843373493976No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG3712.328062248995984No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG2521.5813253012048192No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG2431.5248493975903614No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC2391.4997489959839356No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC2201.3805220883534137No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA1601.0040160642570282No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG1230.7718373493975903No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT1130.709086345381526No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT1030.6463353413654618No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA760.4769076305220884No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGTTCTACAC710.4455321285140562No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT690.4329819277108434No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG640.4016064257028112No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGACATGGTTCTACACA590.3702309236947791No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT550.34513052208835343No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC540.338855421686747No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA540.338855421686747No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG530.3325803212851406No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG510.3200301204819277No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG480.30120481927710846No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG470.294929718875502No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACACTGACGACATGGTTCT470.294929718875502No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT470.294929718875502No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG450.28237951807228917No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG430.26982931726907633No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG420.2635542168674699No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCAAGTGCTGAAGTGATGGGC420.2635542168674699No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG410.25727911646586343No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA410.25727911646586343No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA390.24472891566265062No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA380.2384538152610442No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA370.23217871485943772No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT360.2259036144578313No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGTCATTGTCGCTGTCCCATC350.2196285140562249No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG340.2133534136546185No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC320.2008032128514056No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG320.2008032128514056No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTGGAAGGGTAAGAGAGGGT310.19452811244979917No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG300.18825301204819278No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGATCATTGTTCACTG290.18197791164658636No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG290.18197791164658636No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA280.1757028112449799No Hit
CATAGATCATGGGACTTCAGCATGGCATGCTGAAGTGATGGGCTAGATCT280.1757028112449799No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG270.1694277108433735No Hit
CATAGAGTCCAACTATTCCAGCACCACGATCATTGTTCACTGCAGCCTCT270.1694277108433735No Hit
CATAGAAAAAACAGTTGGCCAGGCATGATGGCAGGTGCCTGTAATCCCAG270.1694277108433735No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG270.1694277108433735No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG260.16315261044176707No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA250.15687751004016065No Hit
CATAGATCATGGGACTTCAGCATGGCTCCAGTTAAAAGTGCCAGACCCCA240.15060240963855423No Hit
CATAGACGTGACTAAAAGCATGTTGGTACAAAATATAGACAGTTTACTTG240.15060240963855423No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG240.15060240963855423No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA240.15060240963855423No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA230.14432730923694778No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGCTATACCA230.14432730923694778No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC230.14432730923694778No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGTAAACCAGCTGTCATTG220.13805220883534136No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGACATGGTTCTACA210.13177710843373494No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGAGGCTCACGTCTGTAATCCTGA210.13177710843373494No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACTCCGTCTCTA200.12550200803212852No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG200.12550200803212852No Hit
CATAGACACAACAGAGAGAACGGGCTCAACAGAGATCCCACCATTTGCCA190.1192269076305221No Hit
CATAGATCATGGGACCTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG190.1192269076305221No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCACTGACGACATGGTTCTACAC180.11295180722891565No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG180.11295180722891565No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACTGTGTGCTTGAACCAG180.11295180722891565No Hit
CATAGATCATGGGACTTCAGCATGGCGATGTTTGCAGATTTGGACCTGCG180.11295180722891565No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG170.10667670682730925No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGTGCACCTTCATTGTTGCTC170.10667670682730925No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT170.10667670682730925No Hit
CATAGATCAAGGAAAACACCAGCCCAACACTGACGACATGGTCTACCAGT170.10667670682730925No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG170.10667670682730925No Hit
CATAGATCATGGGACTTCAGCATTGCTTCTTGTGGTAACTGGTCTATGAG170.10667670682730925No Hit
CATAGATCACGTAGAAACTGGAGAGGCCCATCTGATGCTCTGGGGCGCAG160.1004016064257028No Hit
CATAGGTCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG160.1004016064257028No Hit
CATAGACCTCCGACAGTTTTTATGCACCGTACAAGGGGTAAGGCGTACTG160.1004016064257028No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)