FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804424

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804424
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124261
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC94437.599327222539655No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC74706.011540225815018No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA73145.88599802029599No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA64585.197125405396705No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA48773.9248034379250125No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT47443.8177706601427643No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA44473.578757615019998No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA33672.709619269119032No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT30932.4891156517330457No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA30212.431173095339648No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT24131.941880396906511No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA22191.7857573977354115No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA21901.7624194236325152No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC21791.7535670886279684No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA21551.7342529031635028No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT15571.2530077820072267No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAACAAGGGCATGGTCAAGTGT13121.055842138724137No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA12681.0204327987059496No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT11490.9246666291113059No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC10340.8321194904274067No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA10240.824071913150546No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC9970.8023434545030218No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC9320.7500342022034266No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT9010.7250867126451582No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT8520.6856535839885403No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT8100.6518537594257249No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT8090.6510490016980388No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT7880.6341490894166312No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG7800.6277110275951425No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7050.5673541980186865No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG6680.5375781620943015No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA6640.5343591311835572No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA6530.5255067961790103No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6520.5247020384513242No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT5950.4788308479732177No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC5860.47158802842404296No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG5820.46836899751329863No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5510.4434215079550301No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC5500.4426167502273441No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG5410.4353739306781694No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA5240.42169304930750595No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG5080.40881692566452865No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA5010.4031836215707262No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT4930.3967455597492375No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA4760.3830646783785741No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT4500.362140977458736No Hit
CATAGACAGAACACCACACCCCTGTCTACAATGGGCACACTTAACACCTC4120.331560183806665No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA4090.32914591062360676No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4040.3251221219851763No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG4010.3227078488021181No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG3990.321098333346746No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA3980.3202935756190599No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT3840.30902696743145475No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGTGTACAGCCTACATCCCTCA3520.2832747201455002No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACTTTGTTCCCTGGCTTCTCTAT3370.27120335423020897No Hit
CATAGAGTCATTCCAAACTGTGCACTTAGAGTCATTCCAACTCTATAGAT3220.2591319883149178No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG3200.2575224728595456No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3000.24142731830582403No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG2980.23981780285045184No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC2970.2390130451227658No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2900.23337974102896325No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA2860.23016071011821893No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC2670.21487031329218337No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT2650.2132607978368112No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTGGTGAAAAGTAGGGGACA2600.2092370091983808No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA2570.2068227360153226No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG2460.19797040101077573No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT2390.19233709691697315No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2300.18509427736779843No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA2220.17865621554630978No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGTCACTCAAATATAGACCTC2210.17785145781862371No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT2160.1738276691801933No Hit
CATAGACCCCCATGCAACCACATCTATGTGCCCCTTCATTTTGCTGGAAC2150.17302291145250723No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT2130.17141339599713507No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2110.1698038805417629No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT2110.1698038805417629No Hit
CATAGATCTGGGAGGTGAAGAGGACAATCTGGGAGGAACAGGGAGATGTT2100.16899912281407684No Hit
CATAGAATTCCCCAATGTCCTGTGCATAGAATTCCCCAGTGCCCTGTGAT2010.16175630326490212No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT1900.15290396826035524No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT1870.15048969507729698No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT1870.15048969507729698No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCACTTTGTTCCCTGGCTTCT1730.13922308688969184No Hit
CATAGATCTGGGAGGTGAAGAGGACACTGGGAGGAACAGGGAGATGTTCT1720.13841832916200578No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC1700.13680881370663361No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC1690.13600405597894755No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGATCACTTGATCATCCATTGTC1680.13519929825126148No Hit
CATAGACAGTCCTGCCGTGTACATGTGCCGTGTACAGCCTACATCCCTCA1640.13198026734051713No Hit
CATAGATTGCCTCATTGTGCCAGACACACTGACGACAATGGGCACACTTA1590.12795647870208673No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA1520.12232317460828418No Hit
CATAGAATTCCCCAATGTCCTGTACAAACCAAACAATAGCCAGTCTATGA1490.11990890142522592No Hit
CATAGACAGAACACCACACCCCTGTCACACCACAGCCCAGTTTTCCTTCT1450.11668987051448163No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC1430.11508035505910946No Hit
CATAGAAGGGCAATTATCTCATCCTAGACATAGAAGGGCAAGTGTATGGT1410.1134708396037373No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCAAGTATATGACACATTACA1410.1134708396037373No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG1380.11105656642067904No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA1340.10783753550993475No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG1340.10783753550993475No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCGAACAAGGGCATGGTCAAGTGTCT1330.10703277778224866No Hit
CATAGAAGGGCAATTATCTCATCCTAGACACACTGACGACAATGGGCACA1320.10622802005456258No Hit
CATAGAATTCCCCAATGTCCTGTGCAGAATTCCCCAGTGCCCTGTGATTG1320.10622802005456258No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG1310.10542326232687649No Hit
CATAGACAGTCCTGCCGTGTACATGTAGAAGGAAAATGTCAGTGGGCCAT1260.10139947368844608No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)