FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804425

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804425
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124261
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG98927.960663442270705No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG73795.938307272595585No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT73185.889217051206734No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT65315.2558727195177894No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT49253.9634318088539446No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT46963.7791422892138318No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT43593.507938934983623No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT36712.9542656183356No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT33512.6967431454760544No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT29792.397373270776833No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT23691.9064710568883239No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG22291.7938049750122724No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC21981.7688574854540042No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT21871.7600051504494574No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT21251.71011017133292No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT15111.2159889265336672No Hit
CATAGACACTTGACCATGCCCTTGTTCTGCTTTTACAAACTCAAGTGATT12911.0389422264427295No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT12851.0341136800766129No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT11510.9262761445666783No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG11240.9045476859191541No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT10180.8192433667844297No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC9760.7854435422216142No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT8760.7049677694530062No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT8550.6880678571715985No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT7860.6325395739612589No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG7850.6317348162335729No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT7800.6277110275951425No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7110.5721827443848029No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG6660.5359686466389293No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT6600.5311401002728129No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6460.5198734920852077No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT6450.5190687343575217No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC6080.4892926984331367No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG5860.47158802842404296No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC5760.4635404511471822No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG5710.4595166625087518No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC5580.44905481204883274No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA5360.431350142039739No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT5340.42974062658436674No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC5270.42410732249056426No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA5200.4184740183967616No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG5020.4039883792984122No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT4990.40157410611535393No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG4690.3774313742847716No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4380.3524838847265031No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTAGACAGGGGTGTGGTGTTCTGTC4130.3323649415343511No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC4120.331560183806665No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA4030.3243173642574903No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG3930.31626978698062946No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA3920.3154650292529434No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT3880.31224599834219907No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC3810.30661269424839654No Hit
CATAGATGAGGGATGTAGGCTGTACACTACGGTAGGTGGCTTCTGGTGCA3480.2800556892347559No Hit
CATAGAGAAGCCAGGGAACAAAGTGGATCTCAGAGTTAGCTTGCCTCTAT3340.26878908104715077No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGACTCTAAGTGCACAGT3180.25591295740417347No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG3140.25269392649342914No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA3040.24464634921656836No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA3000.24142731830582403No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2890.23257498330127713No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2830.2277464369351607No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT2790.22452740602441637No Hit
CATAGAACTGTCCCCTACTTTTCACCACACTGCTCACGATGGTATTACAT2690.21647982874755553No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT2640.21245604010912517No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC2620.21084652465375298No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2580.20762749374300865No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT2410.1939466123723453No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG2400.19314185464465922No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2290.18428951964011234No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC2260.1818752464570541No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTGCCAAGTAAGTCTACAAAG2230.17946097327399588No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC2180.17543718463556546No Hit
CATAGAGTTCCAGCAAAATGAAGGGGCACATAGATGTGGTTGCATGGGGG2120.170608638269449No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATTGTCCTCTTCACCTCCCAGAT2100.16899912281407684No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2080.16738960735870467No Hit
CATAGACCAGGACAATCACAGGGCACTGGGGAATTCTATGCACAGGACAT2050.16497533417564642No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT2030.16336581872027425No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT1870.15048969507729698No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT1870.15048969507729698No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1840.14807542189423872No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTGTCCTCTTCACCTCCCAGATCT1830.14727066416655266No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1820.14646590643886656No Hit
CATAGAGAAGCCAGGGAACAAAGTGGTACGGTAGGTGGCTTCTGGTGCAT1740.14002784461737794No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1740.14002784461737794No Hit
CATAGAGCAGACAATGGATGATCAAGTGATCTGCTTTTACAAACTCAAGT1680.13519929825126148No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC1660.1335897827958893No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCACATGTACACGGCAGGACTG1620.13037075188514496No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGTCTGGCACAATGA1610.1295659941574589No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA1500.12071365915291202No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAGGACATTGGGGAATTCTATGT1480.11910414369753984No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGTGACAGGGGTGTGGTGTTCTGT1400.1126660818760512No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC1400.1126660818760512No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGCAGTTAGGCTACTTGGG1390.11186132414836512No Hit
CATAGAACTGACCATACACTTGCCCTTCTATGTCTAGGATGAGATAATTG1390.11186132414836512No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG1380.11105656642067904No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACTGAACGAAATTTAGGTGAG1310.10542326232687649No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGTCTAGGATGAGAT1310.10542326232687649No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1300.1046185045991904No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTAGGATGAGATAATTGCC1300.1046185045991904No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG1300.1046185045991904No Hit
CATAGACCAGGACAATCACAGGGCACTGGGGAATTCTGCACAGGACATTG1290.10381374687150433No Hit
CATAGACACTTGACCATGCCCTTGTTCGAACTTTCCCACCGCCCTTTTCT1280.10300898914381824No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)