FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804429

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804429
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86850
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA967211.136442141623489No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT40874.705814622913068No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG38074.383419689119171No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA29383.3828439838802535No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA27893.2112838226827867No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA27373.151410477835348No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT20292.3362118595279218No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG18142.0886586067933215No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT16611.9124928036845135No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA16311.8779504893494532No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT16051.848013816925734No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG15771.8157743235463444No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA15711.8088658606793322No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT15061.7340241796200344No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC14001.6119746689694874No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA13211.521013241220495No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGGCAACATATCAGAAGCAT11871.3667242371905584No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA10561.2158894645941278No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9601.1053540587219344No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT8420.9694876223373632No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT8090.9314910765687967No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT7740.8911917098445595No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7270.8370754173862982No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA6570.7564766839378239No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT6540.7530224525043178No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT6350.7311456534254462No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5920.6816350028785262No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT5690.6551525618883132No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC4960.5710995970063327No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGCCCCCAGGTAGCAAAACAGAG4610.5308002302820956No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC4540.5227403569372482No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4330.49856073690270586No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC4230.48704663212435234No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG4190.48244099021301096No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT3940.4536557282671272No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT3810.4386873920552677No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC3750.4317789291882556No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3660.42141623488773744No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT3560.409902130109384No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3550.40875071963154863No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG3270.3765112262521589No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3250.37420840529648824No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC3230.3719055843408175No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA3180.36614853195164077No Hit
CATAGACCACACACACAACTGAGAGTTACGGCAACATATCAGAAGCATCT3150.3626943005181347No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT3070.35348301669545196No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA3030.3488773747841105No Hit
CATAGATCACCAGATGCCAGTTGTGCGTCTACACATAGGAGGAGCTGACT3030.3488773747841105No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGAGGAGAATGATATTGTTGCAGA3010.3465745538284398No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGGCAACATATCAGAAGC2900.333909038572251No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA2850.3281519861830743No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTAGAAGTGTATTAATTAT2730.3143350604490501No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2730.3143350604490501No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA2700.31088082901554404No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT2700.31088082901554404No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA2700.31088082901554404No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT2690.3097294185377087No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGATAGCGAGAAGAGTGGAGGC2600.2993667242371906No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2510.2890040299366724No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAAAGGTATGTGG2410.27748992515831894No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA2410.27748992515831894No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC2360.2717328727691422No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCAGTGTCCCCAGGTAGCAAAACAG2350.2705814622913068No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2310.2659758203799655No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT2300.26482440990213013No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG2170.24985607369027057No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2050.2360391479562464No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGAGCTTTAAGACCTTTTTCTGTAG2020.23258491652274035No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCATAGATAGCGAGAAGAGTGGA1980.22797927461139897No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1980.22797927461139897No Hit
CATAGATACCTGTCCTCTGCCTCGAGGTCACTGACAGGTCTTAAAGCTCT1950.22452504317789293No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGGCAT1920.2210708117443869No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1850.21301093839953944No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCCGTCTGTTTACTCGGAGA1780.204951065054692No Hit
CATAGATTCAACCAGCCATCCCCAATGACTTGGTCTCATAGGTCACTGAC1770.20379965457685664No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCTAGCCAAATTCCTTACCGATCT1640.18883131836499714No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG1610.18537708693149108No Hit
CATAGAGTGATCCTCCTTTCTCAGCCAGGGCAGAGAGTGTGTTGTATTCT1560.17962003454231434No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1560.17962003454231434No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1550.178468624064479No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA1520.17501439263097296No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1500.17271157167530224No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTAACAATGCCTCACACAC1450.1669545192861255No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTAGGGTACTTTTCTAATCAATA1420.16350028785261944No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT1400.16119746689694875No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1360.15659182498560736No Hit
CATAGAGGCACAGGGATAATGAGGGAGGCTATAGGAATCTTTGGGAGGCT1350.15544041450777202No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCTGTAGAAGTGTATTAATTATCT1330.15313759355210133No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAGCACTATTCTCTGGCCCGTCTAT1250.14392630972941853No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTATGAAGCAGAGGTAGATGG1240.14277489925158318No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA1170.13471502590673576No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTCCTTCCACTACCCACCTGCCT1170.13471502590673576No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG1140.13126079447322972No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1130.13010938399539435No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA1120.128957973517559No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC1050.12089810017271156No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGGCATTCTCTCA1050.12089810017271156No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTGTTTACTCGGAGATTTG1040.11974668969487623No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAAATACAAAAAACTTATCTGGG1020.11744386873920552No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT1010.11629245826137018No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCTAGCCAAATTCCTTA1000.11514104778353484No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGGAGGAGCTGACTTACTG1000.11514104778353484No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTATAGGAGGAGCTGACTTAC980.11283822682786412No Hit
CATAGAGGCACGATCTTGTTTCACTGTTTGGTCTCATAGGGCACTGAGAC980.11283822682786412No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT980.11283822682786412No Hit
CATAGAGTGATCCTCCTTTCTCAGCCGAGTGATCTACAGTTTCAATACTA960.11053540587219345No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCATTCTCTCAGGGCTGTTCTC940.10823258491652274No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGGAGCTGACTTACTGTTCTAT930.10708117443868738No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAACCTCCCACCCCAGCTGTCTATG910.1047783534830167No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCCCCCAGGTAGCAAAACA890.102475532527346No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGATAGCGAGAAGAGTGGAG880.10132412204951066No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTGAGGTCACTGACAGGTCTTAAAG870.1001727115716753No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)